Analysis of interatomic Contacts of Structural Units in PDB entry:
3TFZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TFZ entry

There are 6 chains in PDB entry 3TFZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0VAL 167
B
 HIS 0VAL 164
C
 HIS 0GLY 163
D
 HIS 0GLY 163
E
 GLY -2GLY 162
F
 HIS 0ALA 160
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 3TFZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 23Right-handed alpha
Helix 2
2
A
26 31Right-handed alpha
Helix 3
3
A
127 162Right-handed alpha
Helix 4
4
B
13 23Right-handed alpha
Helix 5
5
B
26 31Right-handed alpha
Helix 6
6
B
127 160Right-handed alpha
Helix 7
7
C
13 23Right-handed alpha
Helix 8
8
C
26 31Right-handed alpha
Helix 9
9
C
127 161Right-handed alpha
Helix 10
10
D
13 23Right-handed alpha
Helix 11
11
D
26 31Right-handed alpha
Helix 12
12
D
127 162Right-handed alpha
Helix 13
13
E
13 23Right-handed alpha
Helix 14
14
E
26 31Right-handed alpha
Helix 15
15
E
127 162Right-handed alpha
Helix 16
16
F
13 23Right-handed alpha
Helix 17
17
F
26 31Right-handed alpha
Helix 18
18
F
121 125Right-handed 310
Helix 19
19
F
127 160Right-handed alpha
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There are 6 sheets in PDB entry 3TFZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 10first strand
Strand 2
A
102 113anti-parallel
Strand 3
A
86 99anti-parallel
Strand 4
A
74 81anti-parallel
Strand 5
A
58 69anti-parallel
Strand 6
A
46 55anti-parallel
Strand 7
A
34 43anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 10first strand
Strand 2
B
102 113anti-parallel
Strand 3
B
86 99anti-parallel
Strand 4
B
74 79anti-parallel
Strand 5
B
59 69anti-parallel
Strand 6
B
46 54anti-parallel
Strand 7
B
34 43anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2 10first strand
Strand 2
C
102 113anti-parallel
Strand 3
C
86 99anti-parallel
Strand 4
C
74 79anti-parallel
Strand 5
C
58 69anti-parallel
Strand 6
C
46 55anti-parallel
Strand 7
C
34 43anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2 10first strand
Strand 2
D
103 113anti-parallel
Strand 3
D
86 97anti-parallel
Strand 4
D
74 81anti-parallel
Strand 5
D
59 69anti-parallel
Strand 6
D
46 54anti-parallel
Strand 7
D
36 43anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
2 10first strand
Strand 2
E
102 113anti-parallel
Strand 3
E
86 99anti-parallel
Strand 4
E
74 81anti-parallel
Strand 5
E
59 69anti-parallel
Strand 6
E
46 54anti-parallel
Strand 7
E
34 43anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
2 10first strand
Strand 2
F
102 113anti-parallel
Strand 3
F
86 99anti-parallel
Strand 4
F
74 81anti-parallel
Strand 5
F
58 69anti-parallel
Strand 6
F
46 55anti-parallel
Strand 7
F
34 43anti-parallel
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