Analysis of interatomic Contacts of Structural Units in PDB entry:
3TGH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TGH entry

There is 1 chain in PDB entry 3TGH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 24GLY 362
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 3TGH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
39 56Right-handed alpha
Helix 2
2
A
78 84Right-handed alpha
Helix 3
3
A
90 94Right-handed 310
Helix 4
4
A
104 109Right-handed alpha
Helix 5
5
A
111 121Right-handed alpha
Helix 6
6
A
191 213Right-handed alpha
Helix 7
7
A
233 240Right-handed alpha
Helix 8
8
A
240 247Right-handed alpha
Helix 9
9
A
336 338Right-handed 310
Helix 10
10
A
339 345Right-handed alpha
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There are 2 sheets in PDB entry 3TGH. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 145first strand
Strand 2
A
98 101parallel
Strand 3
A
60 63parallel
Strand 4
A
27 31parallel
Strand 5
A
298 305anti-parallel
Strand 6
A
308 315anti-parallel
Strand 7
A
320 328anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 159first strand
Strand 2
A
171 179anti-parallel
Strand 3
A
215 219parallel
Strand 4
A
251 254parallel
Strand 5
A
268 273parallel
Strand 6
A
260 265anti-parallel
Strand 7
A
290 294anti-parallel
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