Analysis of interatomic Contacts of Structural Units in PDB entry:
3THA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3THA entry

There are 2 chains in PDB entry 3THA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0PHE 247
B
 ALA 0LYS 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 3THA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 7Right-handed 310
Helix 2
2
A
23 33Right-handed alpha
Helix 3
3
A
34 37Right-handed 310
Helix 4
4
A
56 68Right-handed alpha
Helix 5
5
A
71 82Right-handed alpha
Helix 6
6
A
93 101Right-handed alpha
Helix 7
7
A
101 112Right-handed alpha
Helix 8
8
A
123 126Right-handed 310
Helix 9
9
A
127 137Right-handed alpha
Helix 10
10
A
150 159Right-handed alpha
Helix 11
11
A
177 193Right-handed alpha
Helix 12
12
A
207 215Right-handed alpha
Helix 13
13
A
224 231Right-handed alpha
Helix 14
14
A
235 247Right-handed alpha
Helix 15
15
B
3 7Right-handed 310
Helix 16
16
B
23 33Right-handed alpha
Helix 17
17
B
34 37Right-handed 310
Helix 18
18
B
56 68Right-handed alpha
Helix 19
19
B
71 81Right-handed alpha
Helix 20
20
B
93 101Right-handed alpha
Helix 21
21
B
101 112Right-handed alpha
Helix 22
22
B
123 126Right-handed 310
Helix 23
23
B
127 138Right-handed alpha
Helix 24
24
B
150 159Right-handed alpha
Helix 25
25
B
176 193Right-handed alpha
Helix 26
26
B
208 215Right-handed alpha
Helix 27
27
B
224 231Right-handed alpha
Helix 28
28
B
235 246Right-handed alpha
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There are 2 sheets in PDB entry 3THA. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 141first strand
Strand 2
A
114 118parallel
Strand 3
A
87 91parallel
Strand 4
A
41 45parallel
Strand 5
A
12 18parallel
Strand 6
A
220 223parallel
Strand 7
A
199 202parallel
Strand 8
A
165 168parallel
Strand 9
A
143 146parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
140 141first strand
Strand 2
B
114 118parallel
Strand 3
B
87 91parallel
Strand 4
B
41 45parallel
Strand 5
B
12 18parallel
Strand 6
B
220 223parallel
Strand 7
B
199 202parallel
Strand 8
B
165 168parallel
Strand 9
B
143 145parallel
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