Analysis of interatomic Contacts of Structural Units in PDB entry:
3THN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3THN entry

There is 1 chain in PDB entry 3THN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 7ARG 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 9 helices in PDB entry 3THN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
30 48Right-handed alpha
Helix 2
2
A
67 85Right-handed alpha
Helix 3
3
A
96 110Right-handed alpha
Helix 4
4
A
142 149Right-handed alpha
Helix 5
5
A
153 169Right-handed alpha
Helix 6
6
A
201 205Right-handed 310
Helix 7
7
A
239 243Right-handed 310
Helix 8
8
A
281 293Right-handed alpha
Helix 9
9
A
312 317Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 3THN. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 115first strand
Strand 2
A
87 89parallel
Strand 3
A
52 55parallel
Strand 4
A
8 12parallel
Strand 5
A
248 253anti-parallel
Strand 6
A
261 266anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 21first strand
Strand 2
A
28 29anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 125first strand
Strand 2
A
131 137anti-parallel
Strand 3
A
174 180parallel
Strand 4
A
211 215parallel
Strand 5
A
229 231parallel
Strand 6
A
221 224anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 279first strand
Strand 2
A
298 305parallel
Strand 3
A
320 324parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il