Analysis of interatomic Contacts of Structural Units in PDB entry:
3TIG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TIG entry

There is 1 chain in PDB entry 3TIG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -2LEU 377
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 3TIG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 24Right-handed alpha
Helix 2
2
A
48 52Right-handed 310
Helix 3
3
A
68 73Right-handed alpha
Helix 4
4
A
73 84Right-handed alpha
Helix 5
5
A
84 89Right-handed alpha
Helix 6
6
A
128 141Right-handed alpha
Helix 7
7
A
166 177Right-handed alpha
Helix 8
8
A
263 272Right-handed alpha
Helix 9
9
A
278 283Right-handed alpha
Helix 10
10
A
283 303Right-handed alpha
Helix 11
11
A
342 354Right-handed alpha
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There are 4 sheets in PDB entry 3TIG. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 29first strand
Strand 2
A
2 6parallel
Strand 3
A
39 41parallel
Strand 4
A
61 62parallel
Strand 5
A
310 311parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 99first strand
Strand 2
A
180 184anti-parallel
Strand 3
A
147 151anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 223first strand
Strand 2
A
199 207anti-parallel
Strand 3
A
313 321anti-parallel
Strand 4
A
327 333anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 223first strand
Strand 2
A
199 207anti-parallel
Strand 3
A
213 215anti-parallel
Strand 4
A
375 376anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il