Analysis of interatomic Contacts of Structural Units in PDB entry:
3TIQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3TIQ entry

There are 2 chains in PDB entry 3TIQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 420	THR 629
B	PRO 416	THR 629

There are no helices in PDB entry 3TIQ

There are 16 sheets in PDB entry 3TIQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	423	433	first strand
Strand 2	A	459	469	anti-parallel
Strand 3	A	476	479	anti-parallel

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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	423	433	first strand
Strand 2	A	459	469	anti-parallel
Strand 3	A	483	488	anti-parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	437	441	first strand
Strand 2	A	493	497	parallel
Strand 3	A	450	454	anti-parallel

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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	500	502	first strand
Strand 2	A	527	529	anti-parallel
Strand 3	A	536	538	anti-parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	506	510	first strand
Strand 2	A	543	547	parallel
Strand 3	A	519	522	anti-parallel

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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	550	551	first strand
Strand 2	A	595	597	anti-parallel
Strand 3	A	604	607	anti-parallel

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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	555	561	first strand
Strand 2	A	587	593	anti-parallel
Strand 3	A	611	616	anti-parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	565	569	first strand
Strand 2	A	621	625	parallel
Strand 3	A	578	582	anti-parallel

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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	423	433	first strand
Strand 2	B	459	470	anti-parallel
Strand 3	B	475	479	anti-parallel

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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	423	433	first strand
Strand 2	B	459	470	anti-parallel
Strand 3	B	483	488	anti-parallel

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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	437	441	first strand
Strand 2	B	493	497	parallel
Strand 3	B	450	454	anti-parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	500	502	first strand
Strand 2	B	527	529	anti-parallel
Strand 3	B	536	538	anti-parallel

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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	506	510	first strand
Strand 2	B	543	547	parallel
Strand 3	B	519	522	anti-parallel

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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	550	551	first strand
Strand 2	B	595	597	anti-parallel
Strand 3	B	604	607	anti-parallel

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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	555	561	first strand
Strand 2	B	587	593	anti-parallel
Strand 3	B	611	616	anti-parallel

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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	565	569	first strand
Strand 2	B	621	625	parallel
Strand 3	B	578	582	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3TIQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
3TIQ