Analysis of interatomic Contacts of Structural Units in PDB entry:
3TJZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TJZ entry

There are 6 chains in PDB entry 3TJZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 18SER 176
B
 GLN 20LEU 311
C
 GLU 7VAL 146
D
 MET 18SER 176
E
 LYS 24LEU 311
F
 GLU 7VAL 146
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 3TJZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 40Right-handed alpha
Helix 2
2
A
71 76Right-handed alpha
Helix 3
3
A
78 83Right-handed alpha
Helix 4
4
A
99 111Right-handed alpha
Helix 5
5
A
113 117Right-handed 310
Helix 6
6
A
135 144Right-handed alpha
Helix 7
7
A
145 148Right-handed 310
Helix 8
8
A
165 175Right-handed alpha
Helix 9
9
B
23 31Right-handed alpha
Helix 10
10
B
32 34Right-handed 310
Helix 11
11
B
40 58Right-handed alpha
Helix 12
12
B
62 75Right-handed alpha
Helix 13
13
B
76 79Right-handed 310
Helix 14
14
B
81 96Right-handed alpha
Helix 15
15
B
101 104Right-handed 310
Helix 16
16
B
105 115Right-handed alpha
Helix 17
17
B
117 132Right-handed alpha
Helix 18
18
B
136 149Right-handed alpha
Helix 19
19
B
152 167Right-handed alpha
Helix 20
20
B
170 176Right-handed alpha
Helix 21
21
B
177 185Right-handed alpha
Helix 22
22
B
189 205Right-handed alpha
Helix 23
23
B
207 220Right-handed alpha
Helix 24
24
B
225 237Right-handed alpha
Helix 25
25
B
263 275Right-handed alpha
Helix 26
26
B
291 298Right-handed alpha
Helix 27
27
B
303 310Right-handed alpha
Helix 28
28
C
37 53Right-handed alpha
Helix 29
29
C
86 106Right-handed alpha
Helix 30
30
C
110 117Right-handed alpha
Helix 31
31
C
117 128Right-handed alpha
Helix 32
32
C
138 145Right-handed alpha
Helix 33
33
D
29 40Right-handed alpha
Helix 34
34
D
71 76Right-handed alpha
Helix 35
35
D
77 82Right-handed 310
Helix 36
36
D
99 112Right-handed alpha
Helix 37
37
D
135 143Right-handed alpha
Helix 38
38
D
165 175Right-handed alpha
Helix 39
39
E
25 31Right-handed alpha
Helix 40
40
E
32 36Right-handed 310
Helix 41
41
E
40 57Right-handed alpha
Helix 42
42
E
62 75Right-handed alpha
Helix 43
43
E
76 79Right-handed 310
Helix 44
44
E
81 96Right-handed alpha
Helix 45
45
E
101 104Right-handed 310
Helix 46
46
E
105 114Right-handed alpha
Helix 47
47
E
117 131Right-handed alpha
Helix 48
48
E
136 149Right-handed alpha
Helix 49
49
E
152 166Right-handed alpha
Helix 50
50
E
166 175Right-handed alpha
Helix 51
51
E
177 185Right-handed alpha
Helix 52
52
E
189 205Right-handed alpha
Helix 53
53
E
207 221Right-handed alpha
Helix 54
54
E
225 238Right-handed alpha
Helix 55
55
E
263 274Right-handed alpha
Helix 56
56
E
291 298Right-handed alpha
Helix 57
57
E
302 309Right-handed alpha
Helix 58
58
F
37 53Right-handed alpha
Helix 59
59
F
86 105Right-handed alpha
Helix 60
60
F
110 117Right-handed alpha
Helix 61
61
F
117 128Right-handed alpha
Helix 62
62
F
138 145Right-handed alpha
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There are 6 sheets in PDB entry 3TJZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 58first strand
Strand 2
A
61 68anti-parallel
Strand 3
A
19 23parallel
Strand 4
A
87 93parallel
Strand 5
A
120 126parallel
Strand 6
A
153 157parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
25 30first strand
Strand 2
C
13 19anti-parallel
Strand 3
C
76 82anti-parallel
Strand 4
C
65 71anti-parallel
Strand 5
C
59 62anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
129 130first strand
Strand 2
C
133 134anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
51 58first strand
Strand 2
D
61 68anti-parallel
Strand 3
D
19 23parallel
Strand 4
D
87 93parallel
Strand 5
D
120 126parallel
Strand 6
D
153 157parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
25 30first strand
Strand 2
F
13 19anti-parallel
Strand 3
F
76 82anti-parallel
Strand 4
F
65 71anti-parallel
Strand 5
F
59 62anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
129 130first strand
Strand 2
F
133 134anti-parallel
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