Analysis of interatomic Contacts of Structural Units in PDB entry:
3TL2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TL2 entry

There is 1 chain in PDB entry 3TL2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3TL2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 27Right-handed alpha
Helix 2
2
A
37 39Right-handed 310
Helix 3
3
A
40 59Right-handed alpha
Helix 4
4
A
69 74Right-handed 310
Helix 5
5
A
92 115Right-handed alpha
Helix 6
6
A
126 139Right-handed alpha
Helix 7
7
A
141 143Right-handed 310
Helix 8
8
A
149 166Right-handed alpha
Helix 9
9
A
168 170Right-handed 310
Helix 10
10
A
180 184Right-handed 310
Helix 11
11
A
188 190Right-handed 310
Helix 12
12
A
199 201Right-handed 310
Helix 13
13
A
203 216Right-handed alpha
Helix 14
14
A
216 226Right-handed alpha
Helix 15
15
A
231 247Right-handed alpha
Helix 16
16
A
262 264Right-handed 310
Helix 17
17
A
290 309Right-handed alpha
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There are 4 sheets in PDB entry 3TL2. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 67first strand
Strand 2
A
31 35parallel
Strand 3
A
7 11parallel
Strand 4
A
78 81parallel
Strand 5
A
119 122parallel
Strand 6
A
145 147parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 173first strand
Strand 2
A
192 193anti-parallel
Strand 3
A
196 197anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 177first strand
Strand 2
A
185 186anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 260first strand
Strand 2
A
266 277anti-parallel
Strand 3
A
280 284anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il