Analysis of interatomic Contacts of Structural Units in PDB entry:
3TLX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TLX entry

There are 4 chains in PDB entry 3TLX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 8GLY 242
B
 GLU 3GLY 242
C
 GLU 3ASP 241
D
 GLU 6GLY 242
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 3TLX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 25Right-handed alpha
Helix 2
2
A
40 53Right-handed alpha
Helix 3
3
A
59 67Right-handed alpha
Helix 4
4
A
71 83Right-handed alpha
Helix 5
5
A
88 100Right-handed alpha
Helix 6
6
A
101 106Right-handed 310
Helix 7
7
A
117 131Right-handed alpha
Helix 8
8
A
144 154Right-handed alpha
Helix 9
9
A
188 191Right-handed 310
Helix 10
10
A
192 207Right-handed alpha
Helix 11
11
A
209 217Right-handed alpha
Helix 12
12
A
228 242Right-handed alpha
Helix 13
13
B
9 25Right-handed alpha
Helix 14
14
B
40 53Right-handed alpha
Helix 15
15
B
59 67Right-handed alpha
Helix 16
16
B
71 83Right-handed alpha
Helix 17
17
B
88 101Right-handed alpha
Helix 18
18
B
102 106Right-handed 310
Helix 19
19
B
117 132Right-handed alpha
Helix 20
20
B
144 154Right-handed alpha
Helix 21
21
B
188 191Right-handed 310
Helix 22
22
B
192 207Right-handed alpha
Helix 23
23
B
208 217Right-handed alpha
Helix 24
24
B
228 242Right-handed alpha
Helix 25
25
C
9 25Right-handed alpha
Helix 26
26
C
39 53Right-handed alpha
Helix 27
27
C
93 98Right-handed alpha
Helix 28
28
C
118 131Right-handed alpha
Helix 29
29
C
149 154Right-handed alpha
Helix 30
30
C
193 207Right-handed alpha
Helix 31
31
C
208 217Right-handed alpha
Helix 32
32
C
228 241Right-handed alpha
Helix 33
33
D
9 25Right-handed alpha
Helix 34
34
D
43 53Right-handed alpha
Helix 35
35
D
75 83Right-handed alpha
Helix 36
36
D
88 96Right-handed alpha
Helix 37
37
D
103 107Right-handed 310
Helix 38
38
D
117 131Right-handed alpha
Helix 39
39
D
144 154Right-handed alpha
Helix 40
40
D
195 207Right-handed alpha
Helix 41
41
D
208 217Right-handed alpha
Helix 42
42
D
228 242Right-handed alpha
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There are 6 sheets in PDB entry 3TLX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 58first strand
Strand 2
A
108 112parallel
Strand 3
A
29 34parallel
Strand 4
A
137 142parallel
Strand 5
A
220 224parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 158first strand
Strand 2
A
163 166anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 58first strand
Strand 2
B
108 112parallel
Strand 3
B
29 34parallel
Strand 4
B
137 142parallel
Strand 5
B
220 224parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 158first strand
Strand 2
B
163 166anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
54 57first strand
Strand 2
C
108 111parallel
Strand 3
C
30 32parallel
Strand 4
C
137 139parallel
Strand 5
C
220 221parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
55 58first strand
Strand 2
D
109 112parallel
Strand 3
D
30 34parallel
Strand 4
D
137 142parallel
Strand 5
D
220 224parallel
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