Analysis of interatomic Contacts of Structural Units in PDB entry:
3TOV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TOV entry

There are 2 chains in PDB entry 3TOV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -2SER 345
B
 ASN -1SER 345
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 3TOV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 21Right-handed alpha
Helix 2
2
A
22 33Right-handed alpha
Helix 3
3
A
45 50Right-handed 310
Helix 4
4
A
66 85Right-handed alpha
Helix 5
5
A
96 107Right-handed alpha
Helix 6
6
A
119 123Right-handed 310
Helix 7
7
A
135 147Right-handed alpha
Helix 8
8
A
162 176Right-handed alpha
Helix 9
9
A
193 197Right-handed 310
Helix 10
10
A
199 213Right-handed alpha
Helix 11
11
A
225 235Right-handed alpha
Helix 12
12
A
248 258Right-handed alpha
Helix 13
13
A
267 275Right-handed alpha
Helix 14
14
A
303 314Right-handed alpha
Helix 15
15
A
319 323Right-handed 310
Helix 16
16
A
330 345Right-handed alpha
Helix 17
17
B
15 22Right-handed alpha
Helix 18
18
B
22 33Right-handed alpha
Helix 19
19
B
45 50Right-handed 310
Helix 20
20
B
70 85Right-handed alpha
Helix 21
21
B
96 107Right-handed alpha
Helix 22
22
B
116 123Right-handed 310
Helix 23
23
B
135 148Right-handed alpha
Helix 24
24
B
162 175Right-handed alpha
Helix 25
25
B
193 197Right-handed 310
Helix 26
26
B
199 213Right-handed alpha
Helix 27
27
B
222 224Right-handed 310
Helix 28
28
B
225 235Right-handed alpha
Helix 29
29
B
248 259Right-handed alpha
Helix 30
30
B
267 276Right-handed alpha
Helix 31
31
B
288 293Right-handed alpha
Helix 32
32
B
314 320Right-handed alpha
Helix 33
33
B
330 344Right-handed alpha
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There are 4 sheets in PDB entry 3TOV. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 62first strand
Strand 2
A
37 43parallel
Strand 3
A
7 11parallel
Strand 4
A
89 92parallel
Strand 5
A
110 113parallel
Strand 6
A
125 126parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 242first strand
Strand 2
A
216 219parallel
Strand 3
A
184 188parallel
Strand 4
A
261 265parallel
Strand 5
A
280 283parallel
Strand 6
A
299 302parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 62first strand
Strand 2
B
37 43parallel
Strand 3
B
7 12parallel
Strand 4
B
89 92parallel
Strand 5
B
110 113parallel
Strand 6
B
125 126parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
241 242first strand
Strand 2
B
216 219parallel
Strand 3
B
184 188parallel
Strand 4
B
261 265parallel
Strand 5
B
280 283parallel
Strand 6
B
299 302parallel
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