Analysis of interatomic Contacts of Structural Units in PDB entry:
3TOX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TOX entry

There are 8 chains in PDB entry 3TOX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 4LYS 257
B
 SER 4LYS 257
C
 SER 4LYS 257
D
 SER 4LYS 257
E
 SER 4LYS 257
F
 SER 4LEU 262
G
 SER 4LYS 257
I
 SER 4LYS 257
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 95 helices in PDB entry 3TOX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 31Right-handed alpha
Helix 2
2
A
41 53Right-handed alpha
Helix 3
3
A
68 84Right-handed alpha
Helix 4
4
A
101 105Right-handed 310
Helix 5
5
A
106 118Right-handed alpha
Helix 6
6
A
118 135Right-handed alpha
Helix 7
7
A
156 179Right-handed alpha
Helix 8
8
A
197 201Right-handed 310
Helix 9
9
A
207 214Right-handed alpha
Helix 10
10
A
223 236Right-handed alpha
Helix 11
11
A
237 240Right-handed 310
Helix 12
12
A
252 256Right-handed 310
Helix 13
13
B
18 31Right-handed alpha
Helix 14
14
B
41 53Right-handed alpha
Helix 15
15
B
68 83Right-handed alpha
Helix 16
16
B
101 105Right-handed 310
Helix 17
17
B
106 118Right-handed alpha
Helix 18
18
B
118 136Right-handed alpha
Helix 19
19
B
156 178Right-handed alpha
Helix 20
20
B
208 215Right-handed alpha
Helix 21
21
B
223 236Right-handed alpha
Helix 22
22
B
237 240Right-handed 310
Helix 23
23
B
252 256Right-handed 310
Helix 24
24
C
18 31Right-handed alpha
Helix 25
25
C
41 53Right-handed alpha
Helix 26
26
C
68 84Right-handed alpha
Helix 27
27
C
101 105Right-handed 310
Helix 28
28
C
106 118Right-handed alpha
Helix 29
29
C
118 135Right-handed alpha
Helix 30
30
C
156 179Right-handed alpha
Helix 31
31
C
197 201Right-handed 310
Helix 32
32
C
207 215Right-handed alpha
Helix 33
33
C
223 236Right-handed alpha
Helix 34
34
C
237 240Right-handed 310
Helix 35
35
C
252 256Right-handed 310
Helix 36
36
D
18 31Right-handed alpha
Helix 37
37
D
41 55Right-handed alpha
Helix 38
38
D
68 84Right-handed alpha
Helix 39
39
D
101 105Right-handed 310
Helix 40
40
D
106 118Right-handed alpha
Helix 41
41
D
118 135Right-handed alpha
Helix 42
42
D
156 179Right-handed alpha
Helix 43
43
D
197 201Right-handed 310
Helix 44
44
D
207 215Right-handed alpha
Helix 45
45
D
223 236Right-handed alpha
Helix 46
46
D
237 240Right-handed 310
Helix 47
47
D
252 256Right-handed 310
Helix 48
48
E
18 31Right-handed alpha
Helix 49
49
E
41 53Right-handed alpha
Helix 50
50
E
68 84Right-handed alpha
Helix 51
51
E
101 105Right-handed 310
Helix 52
52
E
106 118Right-handed alpha
Helix 53
53
E
118 135Right-handed alpha
Helix 54
54
E
156 179Right-handed alpha
Helix 55
55
E
197 201Right-handed 310
Helix 56
56
E
207 215Right-handed alpha
Helix 57
57
E
223 236Right-handed alpha
Helix 58
58
E
237 240Right-handed 310
Helix 59
59
E
252 256Right-handed 310
Helix 60
60
F
18 31Right-handed alpha
Helix 61
61
F
41 55Right-handed alpha
Helix 62
62
F
68 84Right-handed alpha
Helix 63
63
F
101 105Right-handed 310
Helix 64
64
F
106 118Right-handed alpha
Helix 65
65
F
118 135Right-handed alpha
Helix 66
66
F
156 179Right-handed alpha
Helix 67
67
F
207 215Right-handed alpha
Helix 68
68
F
223 236Right-handed alpha
Helix 69
69
F
237 240Right-handed 310
Helix 70
70
F
252 256Right-handed 310
Helix 71
71
G
18 31Right-handed alpha
Helix 72
72
G
41 54Right-handed alpha
Helix 73
73
G
68 84Right-handed alpha
Helix 74
74
G
101 105Right-handed 310
Helix 75
75
G
106 118Right-handed alpha
Helix 76
76
G
118 136Right-handed alpha
Helix 77
77
G
156 179Right-handed alpha
Helix 78
78
G
197 201Right-handed 310
Helix 79
79
G
205 206Right-handed 310
Helix 80
80
G
207 215Right-handed alpha
Helix 81
81
G
223 236Right-handed alpha
Helix 82
82
G
237 240Right-handed 310
Helix 83
83
G
252 256Right-handed 310
Helix 84
84
I
18 31Right-handed alpha
Helix 85
85
I
41 53Right-handed alpha
Helix 86
86
I
68 84Right-handed alpha
Helix 87
87
I
101 105Right-handed 310
Helix 88
88
I
106 118Right-handed alpha
Helix 89
89
I
118 135Right-handed alpha
Helix 90
90
I
156 179Right-handed alpha
Helix 91
91
I
197 201Right-handed 310
Helix 92
92
I
207 215Right-handed alpha
Helix 93
93
I
223 236Right-handed alpha
Helix 94
94
I
237 240Right-handed 310
Helix 95
95
I
252 256Right-handed 310
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There are 8 sheets in PDB entry 3TOX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
34 37parallel
Strand 3
A
10 13parallel
Strand 4
A
88 91parallel
Strand 5
A
138 143parallel
Strand 6
A
182 189parallel
Strand 7
A
246 249parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 63first strand
Strand 2
B
34 39parallel
Strand 3
B
10 14parallel
Strand 4
B
88 91parallel
Strand 5
B
138 143parallel
Strand 6
B
182 189parallel
Strand 7
B
246 249parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
59 61first strand
Strand 2
C
34 37parallel
Strand 3
C
10 13parallel
Strand 4
C
88 91parallel
Strand 5
C
138 143parallel
Strand 6
C
182 189parallel
Strand 7
C
246 249parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
59 61first strand
Strand 2
D
34 37parallel
Strand 3
D
10 13parallel
Strand 4
D
88 91parallel
Strand 5
D
138 143parallel
Strand 6
D
182 189parallel
Strand 7
D
246 249parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
59 63first strand
Strand 2
E
34 39parallel
Strand 3
E
10 13parallel
Strand 4
E
88 91parallel
Strand 5
E
138 143parallel
Strand 6
E
182 189parallel
Strand 7
E
246 249parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
59 63first strand
Strand 2
F
34 39parallel
Strand 3
F
10 14parallel
Strand 4
F
88 91parallel
Strand 5
F
139 143parallel
Strand 6
F
183 189parallel
Strand 7
F
246 249parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
59 63first strand
Strand 2
G
34 39parallel
Strand 3
G
10 13parallel
Strand 4
G
88 91parallel
Strand 5
G
138 143parallel
Strand 6
G
182 189parallel
Strand 7
G
246 249parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
59 61first strand
Strand 2
I
34 37parallel
Strand 3
I
10 13parallel
Strand 4
I
88 91parallel
Strand 5
I
138 143parallel
Strand 6
I
182 189parallel
Strand 7
I
246 249parallel
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