Analysis of interatomic Contacts of Structural Units in PDB entry:
3TQG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TQG entry

There are 2 chains in PDB entry 3TQG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 13ARG 372
B
 GLN 11ARG 372
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 3TQG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
35 42Right-handed alpha
Helix 2
2
A
43 54Right-handed alpha
Helix 3
3
A
58 71Right-handed alpha
Helix 4
4
A
76 85Right-handed alpha
Helix 5
5
A
91 107Right-handed alpha
Helix 6
6
A
111 113Right-handed 310
Helix 7
7
A
114 140Right-handed alpha
Helix 8
8
A
151 162Right-handed alpha
Helix 9
9
A
166 181Right-handed alpha
Helix 10
10
A
186 197Right-handed alpha
Helix 11
11
A
201 214Right-handed alpha
Helix 12
12
A
215 220Right-handed alpha
Helix 13
13
A
220 230Right-handed alpha
Helix 14
14
A
234 248Right-handed alpha
Helix 15
15
A
264 278Right-handed alpha
Helix 16
16
A
284 302Right-handed alpha
Helix 17
17
A
306 318Right-handed alpha
Helix 18
18
A
321 323Right-handed 310
Helix 19
19
A
324 347Right-handed alpha
Helix 20
20
A
367 371Right-handed 310
Helix 21
21
B
35 42Right-handed alpha
Helix 22
22
B
43 54Right-handed alpha
Helix 23
23
B
58 71Right-handed alpha
Helix 24
24
B
76 84Right-handed alpha
Helix 25
25
B
91 107Right-handed alpha
Helix 26
26
B
111 113Right-handed 310
Helix 27
27
B
114 140Right-handed alpha
Helix 28
28
B
151 162Right-handed alpha
Helix 29
29
B
166 181Right-handed alpha
Helix 30
30
B
186 197Right-handed alpha
Helix 31
31
B
201 214Right-handed alpha
Helix 32
32
B
220 230Right-handed alpha
Helix 33
33
B
234 248Right-handed alpha
Helix 34
34
B
264 278Right-handed alpha
Helix 35
35
B
284 302Right-handed alpha
Helix 36
36
B
306 318Right-handed alpha
Helix 37
37
B
321 323Right-handed 310
Helix 38
38
B
324 347Right-handed alpha
Helix 39
39
B
367 371Right-handed 310
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There are 4 sheets in PDB entry 3TQG. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 16first strand
Strand 2
B
356 357parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 21first strand
Strand 2
A
28 30anti-parallel
Strand 3
A
33 34anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 357first strand
Strand 2
B
12 16parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 20first strand
Strand 2
B
29 30anti-parallel
Strand 3
B
33 34anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il