Analysis of interatomic Contacts of Structural Units in PDB entry:
3TR0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TR0 entry

There is 1 chain in PDB entry 3TR0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2LEU 202
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 3TR0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 28Right-handed alpha
Helix 2
2
A
56 67Right-handed alpha
Helix 3
3
A
84 93Right-handed alpha
Helix 4
4
A
102 113Right-handed alpha
Helix 5
5
A
125 135Right-handed alpha
Helix 6
6
A
143 156Right-handed alpha
Helix 7
7
A
157 161Right-handed 310
Helix 8
8
A
169 185Right-handed alpha
Helix 9
9
A
187 195Right-handed alpha
Helix 10
10
A
195 202Right-handed alpha
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There are 2 sheets in PDB entry 3TR0. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 33first strand
Strand 2
A
96 100parallel
Strand 3
A
6 10parallel
Strand 4
A
117 122parallel
Strand 5
A
163 166parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
37 38parallel
Strand 3
A
78 83anti-parallel
Strand 4
A
69 75anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il