Analysis of interatomic Contacts of Structural Units in PDB entry:
3TR6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TR6 entry

There is 1 chain in PDB entry 3TR6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1SER 222
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 3TR6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 19Right-handed alpha
Helix 2
2
A
24 38Right-handed alpha
Helix 3
3
A
40 44Right-handed 310
Helix 4
4
A
46 61Right-handed alpha
Helix 5
5
A
73 81Right-handed alpha
Helix 6
6
A
95 109Right-handed alpha
Helix 7
7
A
121 131Right-handed alpha
Helix 8
8
A
146 148Right-handed 310
Helix 9
9
A
149 160Right-handed alpha
Helix 10
10
A
173 180Right-handed 310
Helix 11
11
A
185 201Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3TR6.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 119first strand
Strand 2
A
88 93parallel
Strand 3
A
64 68parallel
Strand 4
A
138 143parallel
Strand 5
A
161 170parallel
Strand 6
A
215 220anti-parallel
Strand 7
A
204 209anti-parallel
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