Analysis of interatomic Contacts of Structural Units in PDB entry:
3TRH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TRH entry

There are 16 chains in PDB entry 3TRH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3LEU 166
B
 LYS 3LEU 166
C
 ILE 4LEU 166
D
 LYS 3LEU 166
E
 LYS 3LEU 166
F
 ILE 4LEU 166
G
 MSE 1LEU 166
H
 ILE 4LEU 166
I
 ASN 2LEU 166
J
 LYS 3LEU 166
K
 LYS 3LEU 166
L
 ILE 4LEU 166
M
 LYS 3LEU 166
N
 LYS 3LEU 166
O
 LYS 3LEU 166
P
 LYS 3LEU 166
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are109 helices in PDB entry 3TRH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 14Right-handed 310
Helix 2
2
A
15 29Right-handed alpha
Helix 3
3
A
43 57Right-handed alpha
Helix 4
4
A
71 79Right-handed alpha
Helix 5
5
A
96 105Right-handed alpha
Helix 6
6
A
118 135Right-handed alpha
Helix 7
7
A
137 165Right-handed alpha
Helix 8
8
B
12 14Right-handed 310
Helix 9
9
B
15 29Right-handed alpha
Helix 10
10
B
43 57Right-handed alpha
Helix 11
11
B
71 78Right-handed alpha
Helix 12
12
B
96 105Right-handed alpha
Helix 13
13
B
118 134Right-handed alpha
Helix 14
14
B
137 164Right-handed alpha
Helix 15
15
C
12 14Right-handed 310
Helix 16
16
C
15 29Right-handed alpha
Helix 17
17
C
43 57Right-handed alpha
Helix 18
18
C
71 78Right-handed alpha
Helix 19
19
C
96 105Right-handed alpha
Helix 20
20
C
118 134Right-handed alpha
Helix 21
21
C
137 165Right-handed alpha
Helix 22
22
D
12 14Right-handed 310
Helix 23
23
D
15 29Right-handed alpha
Helix 24
24
D
43 57Right-handed alpha
Helix 25
25
D
71 78Right-handed alpha
Helix 26
26
D
96 105Right-handed alpha
Helix 27
27
D
118 135Right-handed alpha
Helix 28
28
D
137 166Right-handed alpha
Helix 29
29
E
12 14Right-handed 310
Helix 30
30
E
15 29Right-handed alpha
Helix 31
31
E
43 58Right-handed alpha
Helix 32
32
E
71 78Right-handed alpha
Helix 33
33
E
96 105Right-handed alpha
Helix 34
34
E
117 135Right-handed alpha
Helix 35
35
E
137 166Right-handed alpha
Helix 36
36
F
12 14Right-handed 310
Helix 37
37
F
15 29Right-handed alpha
Helix 38
38
F
43 57Right-handed alpha
Helix 39
39
F
71 78Right-handed alpha
Helix 40
40
F
96 105Right-handed alpha
Helix 41
41
F
118 134Right-handed alpha
Helix 42
42
F
137 166Right-handed alpha
Helix 43
43
G
15 29Right-handed alpha
Helix 44
44
G
43 57Right-handed alpha
Helix 45
45
G
71 79Right-handed alpha
Helix 46
46
G
96 105Right-handed alpha
Helix 47
47
G
118 134Right-handed alpha
Helix 48
48
G
137 166Right-handed alpha
Helix 49
49
H
12 14Right-handed 310
Helix 50
50
H
15 30Right-handed alpha
Helix 51
51
H
43 58Right-handed alpha
Helix 52
52
H
71 80Right-handed alpha
Helix 53
53
H
96 105Right-handed alpha
Helix 54
54
H
117 134Right-handed alpha
Helix 55
55
H
137 166Right-handed alpha
Helix 56
56
I
15 30Right-handed alpha
Helix 57
57
I
43 57Right-handed alpha
Helix 58
58
I
71 78Right-handed alpha
Helix 59
59
I
96 105Right-handed alpha
Helix 60
60
I
118 134Right-handed alpha
Helix 61
61
I
137 165Right-handed alpha
Helix 62
62
J
12 14Right-handed 310
Helix 63
63
J
15 30Right-handed alpha
Helix 64
64
J
43 57Right-handed alpha
Helix 65
65
J
71 78Right-handed alpha
Helix 66
66
J
96 105Right-handed alpha
Helix 67
67
J
118 134Right-handed alpha
Helix 68
68
J
137 165Right-handed alpha
Helix 69
69
K
12 14Right-handed 310
Helix 70
70
K
15 29Right-handed alpha
Helix 71
71
K
43 58Right-handed alpha
Helix 72
72
K
71 78Right-handed alpha
Helix 73
73
K
96 105Right-handed alpha
Helix 74
74
K
118 134Right-handed alpha
Helix 75
75
K
137 166Right-handed alpha
Helix 76
76
L
12 14Right-handed 310
Helix 77
77
L
15 28Right-handed alpha
Helix 78
78
L
43 57Right-handed alpha
Helix 79
79
L
71 78Right-handed alpha
Helix 80
80
L
96 105Right-handed alpha
Helix 81
81
L
118 134Right-handed alpha
Helix 82
82
L
137 166Right-handed alpha
Helix 83
83
M
12 14Right-handed 310
Helix 84
84
M
15 30Right-handed alpha
Helix 85
85
M
43 58Right-handed alpha
Helix 86
86
M
71 78Right-handed alpha
Helix 87
87
M
96 105Right-handed alpha
Helix 88
88
M
118 134Right-handed alpha
Helix 89
89
M
137 165Right-handed alpha
Helix 90
90
N
12 14Right-handed 310
Helix 91
91
N
15 30Right-handed alpha
Helix 92
92
N
43 57Right-handed alpha
Helix 93
93
N
71 78Right-handed alpha
Helix 94
94
N
96 105Right-handed alpha
Helix 95
95
N
117 135Right-handed alpha
Helix 96
96
N
137 166Right-handed alpha
Helix 97
97
O
15 29Right-handed alpha
Helix 98
98
O
43 58Right-handed alpha
Helix 99
99
O
71 78Right-handed alpha
Helix 100
100
O
96 105Right-handed alpha
Helix 101
101
O
118 134Right-handed alpha
Helix 102
102
O
137 164Right-handed alpha
Helix 103
103
P
12 14Right-handed 310
Helix 104
104
P
15 30Right-handed alpha
Helix 105
105
P
43 57Right-handed alpha
Helix 106
106
P
71 78Right-handed alpha
Helix 107
107
P
96 105Right-handed alpha
Helix 108
108
P
118 135Right-handed alpha
Helix 109
109
P
137 163Right-handed alpha
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There are 16 sheets in PDB entry 3TRH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 37first strand
Strand 2
A
5 10parallel
Strand 3
A
59 66parallel
Strand 4
A
84 88parallel
Strand 5
A
113 114parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 37first strand
Strand 2
B
5 10parallel
Strand 3
B
59 66parallel
Strand 4
B
84 88parallel
Strand 5
B
113 114parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
33 37first strand
Strand 2
C
5 10parallel
Strand 3
C
59 66parallel
Strand 4
C
84 88parallel
Strand 5
C
113 114parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
33 37first strand
Strand 2
D
5 10parallel
Strand 3
D
59 66parallel
Strand 4
D
84 88parallel
Strand 5
D
113 114parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
33 37first strand
Strand 2
E
5 10parallel
Strand 3
E
59 66parallel
Strand 4
E
84 88parallel
Strand 5
E
113 114parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
33 37first strand
Strand 2
F
5 10parallel
Strand 3
F
59 66parallel
Strand 4
F
84 88parallel
Strand 5
F
113 114parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
33 37first strand
Strand 2
G
5 10parallel
Strand 3
G
59 66parallel
Strand 4
G
84 88parallel
Strand 5
G
113 114parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
33 37first strand
Strand 2
H
5 10parallel
Strand 3
H
59 66parallel
Strand 4
H
84 88parallel
Strand 5
H
113 114parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
33 37first strand
Strand 2
I
5 10parallel
Strand 3
I
59 66parallel
Strand 4
I
84 88parallel
Strand 5
I
113 114parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
33 37first strand
Strand 2
J
5 10parallel
Strand 3
J
59 66parallel
Strand 4
J
84 88parallel
Strand 5
J
113 114parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
33 37first strand
Strand 2
K
5 10parallel
Strand 3
K
59 66parallel
Strand 4
K
84 88parallel
Strand 5
K
113 114parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
33 37first strand
Strand 2
L
5 10parallel
Strand 3
L
59 66parallel
Strand 4
L
84 88parallel
Strand 5
L
113 114parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
33 37first strand
Strand 2
M
5 10parallel
Strand 3
M
59 66parallel
Strand 4
M
84 88parallel
Strand 5
M
113 114parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
33 37first strand
Strand 2
N
5 10parallel
Strand 3
N
59 66parallel
Strand 4
N
84 88parallel
Strand 5
N
113 114parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
33 37first strand
Strand 2
O
5 10parallel
Strand 3
O
59 66parallel
Strand 4
O
84 88parallel
Strand 5
O
113 114parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
33 37first strand
Strand 2
P
5 10parallel
Strand 3
P
59 66parallel
Strand 4
P
84 88parallel
Strand 5
P
113 114parallel
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