Analysis of interatomic Contacts of Structural Units in PDB entry:
3TSB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TSB entry

There are 2 chains in PDB entry 3TSB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN -3SER 486
B
 GLU -8SER 486
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 42 helices in PDB entry 3TSB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-1 4Right-handed alpha
Helix 2
2
A
12 14Right-handed 310
Helix 3
3
A
26 30Right-handed 310
Helix 4
4
A
56 66Right-handed alpha
Helix 5
5
A
77 90Right-handed alpha
Helix 6
6
A
107 119Right-handed alpha
Helix 7
7
A
140 144Right-handed alpha
Helix 8
8
A
152 157Right-handed alpha
Helix 9
9
A
170 182Right-handed alpha
Helix 10
10
A
201 210Right-handed alpha
Helix 11
11
A
232 243Right-handed alpha
Helix 12
12
A
257 271Right-handed alpha
Helix 13
13
A
283 293Right-handed alpha
Helix 14
14
A
309 314Right-handed alpha
Helix 15
15
A
319 334Right-handed alpha
Helix 16
16
A
346 356Right-handed alpha
Helix 17
17
A
364 369Right-handed alpha
Helix 18
18
A
393 399Right-handed alpha
Helix 19
19
A
400 406Right-handed 310
Helix 20
20
A
427 447Right-handed alpha
Helix 21
21
A
450 458Right-handed alpha
Helix 22
22
A
464 472Right-handed alpha
Helix 23
23
B
-1 4Right-handed alpha
Helix 24
24
B
12 14Right-handed 310
Helix 25
25
B
56 66Right-handed alpha
Helix 26
26
B
77 90Right-handed alpha
Helix 27
27
B
139 144Right-handed alpha
Helix 28
28
B
170 181Right-handed alpha
Helix 29
29
B
201 210Right-handed alpha
Helix 30
30
B
232 243Right-handed alpha
Helix 31
31
B
257 271Right-handed alpha
Helix 32
32
B
283 294Right-handed alpha
Helix 33
33
B
309 314Right-handed alpha
Helix 34
34
B
319 332Right-handed alpha
Helix 35
35
B
333 335Right-handed 310
Helix 36
36
B
346 356Right-handed alpha
Helix 37
37
B
393 398Right-handed alpha
Helix 38
38
B
399 400Right-handed 310
Helix 39
39
B
401 406Right-handed 310
Helix 40
40
B
427 446Right-handed alpha
Helix 41
41
B
450 458Right-handed alpha
Helix 42
42
B
464 472Right-handed alpha
Back to top of page

There are 11 sheets in PDB entry 3TSB. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 18first strand
Strand 2
A
460 462anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 37first strand
Strand 2
A
40 42anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
A
69 72parallel
Strand 3
A
224 227parallel
Strand 4
A
247 251parallel
Strand 5
A
275 281parallel
Strand 6
A
297 300parallel
Strand 7
A
338 341parallel
Strand 8
A
360 363parallel
Strand 9
A
46 48parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 126first strand
Strand 2
A
134 139anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 189first strand
Strand 2
A
195 200anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 380first strand
Strand 2
A
383 389anti-parallel
Strand 3
A
419 423anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 18first strand
Strand 2
B
460 462anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 37first strand
Strand 2
B
40 42anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 48first strand
Strand 2
B
69 72parallel
Strand 3
B
224 227parallel
Strand 4
B
247 251parallel
Strand 5
B
276 281parallel
Strand 6
B
297 300parallel
Strand 7
B
338 341parallel
Strand 8
B
360 363parallel
Strand 9
B
46 48parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 186first strand
Strand 2
B
199 200anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
378 379first strand
Strand 2
B
384 389anti-parallel
Strand 3
B
419 423anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il