Analysis of interatomic Contacts of Structural Units in PDB entry:
3TSC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TSC entry

There are 4 chains in PDB entry 3TSC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 3TYR 273
B
 GLY 3TYR 273
C
 GLY 3TYR 273
D
 GLY 3TYR 273
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 3TSC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 30Right-handed alpha
Helix 2
2
A
53 67Right-handed alpha
Helix 3
3
A
80 96Right-handed alpha
Helix 4
4
A
112 116Right-handed 310
Helix 5
5
A
117 129Right-handed alpha
Helix 6
6
A
129 147Right-handed alpha
Helix 7
7
A
157 161Right-handed 310
Helix 8
8
A
167 189Right-handed alpha
Helix 9
9
A
205 208Right-handed 310
Helix 10
10
A
209 222Right-handed alpha
Helix 11
11
A
223 227Right-handed 310
Helix 12
12
A
240 253Right-handed alpha
Helix 13
13
A
254 257Right-handed 310
Helix 14
14
A
269 273Right-handed 310
Helix 15
15
B
17 30Right-handed alpha
Helix 16
16
B
53 67Right-handed alpha
Helix 17
17
B
80 96Right-handed alpha
Helix 18
18
B
112 116Right-handed 310
Helix 19
19
B
117 129Right-handed alpha
Helix 20
20
B
129 147Right-handed alpha
Helix 21
21
B
157 161Right-handed 310
Helix 22
22
B
167 189Right-handed alpha
Helix 23
23
B
205 209Right-handed 310
Helix 24
24
B
211 222Right-handed alpha
Helix 25
25
B
223 227Right-handed 310
Helix 26
26
B
240 253Right-handed alpha
Helix 27
27
B
254 257Right-handed 310
Helix 28
28
B
269 273Right-handed 310
Helix 29
29
C
17 30Right-handed alpha
Helix 30
30
C
53 67Right-handed alpha
Helix 31
31
C
80 96Right-handed alpha
Helix 32
32
C
112 116Right-handed 310
Helix 33
33
C
117 129Right-handed alpha
Helix 34
34
C
129 147Right-handed alpha
Helix 35
35
C
157 161Right-handed 310
Helix 36
36
C
167 189Right-handed alpha
Helix 37
37
C
205 209Right-handed 310
Helix 38
38
C
211 222Right-handed alpha
Helix 39
39
C
223 227Right-handed 310
Helix 40
40
C
240 253Right-handed alpha
Helix 41
41
C
254 257Right-handed 310
Helix 42
42
C
269 273Right-handed 310
Helix 43
43
D
17 30Right-handed alpha
Helix 44
44
D
53 67Right-handed alpha
Helix 45
45
D
80 96Right-handed alpha
Helix 46
46
D
112 116Right-handed 310
Helix 47
47
D
117 129Right-handed alpha
Helix 48
48
D
129 146Right-handed alpha
Helix 49
49
D
157 161Right-handed 310
Helix 50
50
D
167 189Right-handed alpha
Helix 51
51
D
205 209Right-handed 310
Helix 52
52
D
211 222Right-handed alpha
Helix 53
53
D
223 227Right-handed 310
Helix 54
54
D
240 253Right-handed alpha
Helix 55
55
D
254 257Right-handed 310
Helix 56
56
D
269 273Right-handed 310
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There are 4 sheets in PDB entry 3TSC. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 75first strand
Strand 2
A
33 38parallel
Strand 3
A
9 13parallel
Strand 4
A
100 103parallel
Strand 5
A
150 155parallel
Strand 6
A
193 200parallel
Strand 7
A
263 266parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 75first strand
Strand 2
B
33 38parallel
Strand 3
B
9 13parallel
Strand 4
B
100 103parallel
Strand 5
B
150 155parallel
Strand 6
B
193 200parallel
Strand 7
B
263 266parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
71 75first strand
Strand 2
C
33 38parallel
Strand 3
C
9 13parallel
Strand 4
C
100 103parallel
Strand 5
C
150 155parallel
Strand 6
C
193 200parallel
Strand 7
C
263 266parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
71 75first strand
Strand 2
D
33 38parallel
Strand 3
D
9 13parallel
Strand 4
D
100 103parallel
Strand 5
D
150 155parallel
Strand 6
D
193 200parallel
Strand 7
D
263 266parallel
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