Analysis of interatomic Contacts of Structural Units in PDB entry:
3TSH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TSH entry

There is 1 chain in PDB entry 3TSH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 9LYS 498
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 3TSH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 19Right-handed alpha
Helix 2
2
A
31 38Right-handed alpha
Helix 3
3
A
62 75Right-handed alpha
Helix 4
4
A
128 140Right-handed alpha
Helix 5
5
A
154 161Right-handed alpha
Helix 6
6
A
167 172Right-handed alpha
Helix 7
7
A
192 196Right-handed alpha
Helix 8
8
A
198 205Right-handed alpha
Helix 9
9
A
241 256Right-handed alpha
Helix 10
10
A
280 292Right-handed alpha
Helix 11
11
A
298 302Right-handed 310
Helix 12
12
A
306 317Right-handed alpha
Helix 13
13
A
321 328Right-handed alpha
Helix 14
14
A
349 363Right-handed alpha
Helix 15
15
A
376 381Right-handed alpha
Helix 16
16
A
410 427Right-handed alpha
Helix 17
17
A
441 445Right-handed 310
Helix 18
18
A
455 468Right-handed alpha
Helix 19
19
A
470 482Right-handed alpha
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There are 5 sheets in PDB entry 3TSH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 26first strand
Strand 2
A
55 57anti-parallel
Strand 3
A
101 105parallel
Strand 4
A
78 82parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 115first strand
Strand 2
A
120 124anti-parallel
Strand 3
A
214 221anti-parallel
Strand 4
A
178 184anti-parallel
Strand 5
A
190 191anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 144first strand
Strand 2
A
223 224anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 305first strand
Strand 2
A
229 237anti-parallel
Strand 3
A
270 277anti-parallel
Strand 4
A
260 266anti-parallel
Strand 5
A
368 373anti-parallel
Strand 6
A
396 404anti-parallel
Strand 7
A
336 344anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
449 450first strand
Strand 2
A
453 454anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il