Analysis of interatomic Contacts of Structural Units in PDB entry:
3TTE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TTE entry

There are 2 chains in PDB entry 3TTE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 0THR 360
B
 THR 2THR 360
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 3TTE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
55 57Right-handed 310
Helix 2
2
A
58 72Right-handed alpha
Helix 3
3
A
79 92Right-handed alpha
Helix 4
4
A
98 118Right-handed alpha
Helix 5
5
A
122 127Right-handed alpha
Helix 6
6
A
144 158Right-handed alpha
Helix 7
7
A
172 188Right-handed alpha
Helix 8
8
A
202 214Right-handed alpha
Helix 9
9
A
215 217Right-handed 310
Helix 10
10
A
229 240Right-handed alpha
Helix 11
11
A
251 262Right-handed alpha
Helix 12
12
A
276 292Right-handed alpha
Helix 13
13
A
300 308Right-handed alpha
Helix 14
14
A
309 311Right-handed 310
Helix 15
15
A
323 327Right-handed 310
Helix 16
16
A
350 357Right-handed alpha
Helix 17
17
B
55 57Right-handed 310
Helix 18
18
B
58 74Right-handed alpha
Helix 19
19
B
79 92Right-handed alpha
Helix 20
20
B
98 119Right-handed alpha
Helix 21
21
B
122 127Right-handed alpha
Helix 22
22
B
144 158Right-handed alpha
Helix 23
23
B
172 188Right-handed alpha
Helix 24
24
B
202 214Right-handed alpha
Helix 25
25
B
215 217Right-handed 310
Helix 26
26
B
229 240Right-handed alpha
Helix 27
27
B
251 262Right-handed alpha
Helix 28
28
B
276 291Right-handed alpha
Helix 29
29
B
300 308Right-handed alpha
Helix 30
30
B
309 311Right-handed 310
Helix 31
31
B
323 327Right-handed 310
Helix 32
32
B
350 357Right-handed alpha
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There are 6 sheets in PDB entry 3TTE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 52first strand
Strand 2
A
28 41anti-parallel
Strand 3
A
6 23anti-parallel
Strand 4
A
358 359anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 268first strand
Strand 2
A
244 246parallel
Strand 3
A
220 222parallel
Strand 4
A
192 196parallel
Strand 5
A
163 167parallel
Strand 6
A
134 139parallel
Strand 7
A
317 319parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 268first strand
Strand 2
A
244 246parallel
Strand 3
A
220 222parallel
Strand 4
A
192 196parallel
Strand 5
A
163 167parallel
Strand 6
A
134 139parallel
Strand 7
A
337 338anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 52first strand
Strand 2
B
31 41anti-parallel
Strand 3
B
6 17anti-parallel
Strand 4
B
358 359anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
267 268first strand
Strand 2
B
244 246parallel
Strand 3
B
220 222parallel
Strand 4
B
192 196parallel
Strand 5
B
163 167parallel
Strand 6
B
134 139parallel
Strand 7
B
317 319parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
267 268first strand
Strand 2
B
244 246parallel
Strand 3
B
220 222parallel
Strand 4
B
192 196parallel
Strand 5
B
163 167parallel
Strand 6
B
134 139parallel
Strand 7
B
337 338anti-parallel
Strand 8
B
333 334anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il