Analysis of interatomic Contacts of Structural Units in PDB entry:
3TTY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3TTY entry

There are 6 chains in PDB entry 3TTY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ALA 675
B	MET 1	ALA 675
C	MET 1	ALA 675
D	MET 1	ALA 675
E	MET 1	ALA 675
F	MET 1	ALA 675

There are139 helices in PDB entry 3TTY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	16	20	Right-handed 310
Helix 2	2	A	21	36	Right-handed alpha
Helix 3	3	A	46	51	Right-handed alpha
Helix 4	4	A	59	72	Right-handed alpha
Helix 5	5	A	86	93	Right-handed alpha
Helix 6	6	A	94	97	Right-handed 310
Helix 7	7	A	118	136	Right-handed alpha
Helix 8	8	A	157	173	Right-handed alpha
Helix 9	9	A	174	182	Right-handed alpha
Helix 10	10	A	185	189	Right-handed 310
Helix 11	11	A	193	197	Right-handed 310
Helix 12	12	A	214	244	Right-handed alpha
Helix 13	13	A	261	267	Right-handed alpha
Helix 14	14	A	283	297	Right-handed alpha
Helix 15	15	A	325	337	Right-handed alpha
Helix 16	16	A	352	356	Right-handed 310
Helix 17	17	A	370	387	Right-handed alpha
Helix 18	18	A	404	414	Right-handed alpha
Helix 19	19	A	422	436	Right-handed alpha
Helix 20	20	A	467	478	Right-handed alpha
Helix 21	21	A	503	505	Right-handed 310
Helix 22	22	A	506	511	Right-handed alpha
Helix 23	23	A	590	605	Right-handed alpha
Helix 24	24	B	16	20	Right-handed 310
Helix 25	25	B	21	36	Right-handed alpha
Helix 26	26	B	46	51	Right-handed alpha
Helix 27	27	B	59	72	Right-handed alpha
Helix 28	28	B	86	93	Right-handed alpha
Helix 29	29	B	94	97	Right-handed 310
Helix 30	30	B	118	137	Right-handed alpha
Helix 31	31	B	157	173	Right-handed alpha
Helix 32	32	B	174	182	Right-handed alpha
Helix 33	33	B	185	189	Right-handed 310
Helix 34	34	B	193	197	Right-handed 310
Helix 35	35	B	214	244	Right-handed alpha
Helix 36	36	B	261	267	Right-handed alpha
Helix 37	37	B	283	297	Right-handed alpha
Helix 38	38	B	325	337	Right-handed alpha
Helix 39	39	B	352	356	Right-handed 310
Helix 40	40	B	370	387	Right-handed alpha
Helix 41	41	B	404	414	Right-handed alpha
Helix 42	42	B	422	437	Right-handed alpha
Helix 43	43	B	467	478	Right-handed alpha
Helix 44	44	B	503	505	Right-handed 310
Helix 45	45	B	506	511	Right-handed alpha
Helix 46	46	B	590	606	Right-handed alpha
Helix 47	47	C	16	20	Right-handed 310
Helix 48	48	C	21	36	Right-handed alpha
Helix 49	49	C	46	51	Right-handed alpha
Helix 50	50	C	59	72	Right-handed alpha
Helix 51	51	C	86	93	Right-handed alpha
Helix 52	52	C	94	97	Right-handed 310
Helix 53	53	C	118	136	Right-handed alpha
Helix 54	54	C	157	173	Right-handed alpha
Helix 55	55	C	174	182	Right-handed alpha
Helix 56	56	C	185	189	Right-handed 310
Helix 57	57	C	193	197	Right-handed 310
Helix 58	58	C	214	244	Right-handed alpha
Helix 59	59	C	261	267	Right-handed alpha
Helix 60	60	C	283	297	Right-handed alpha
Helix 61	61	C	325	337	Right-handed alpha
Helix 62	62	C	352	356	Right-handed 310
Helix 63	63	C	370	387	Right-handed alpha
Helix 64	64	C	404	414	Right-handed alpha
Helix 65	65	C	422	436	Right-handed alpha
Helix 66	66	C	467	478	Right-handed alpha
Helix 67	67	C	503	505	Right-handed 310
Helix 68	68	C	506	511	Right-handed alpha
Helix 69	69	C	590	605	Right-handed alpha
Helix 70	70	D	16	20	Right-handed 310
Helix 71	71	D	21	36	Right-handed alpha
Helix 72	72	D	46	50	Right-handed alpha
Helix 73	73	D	59	72	Right-handed alpha
Helix 74	74	D	86	93	Right-handed alpha
Helix 75	75	D	94	97	Right-handed 310
Helix 76	76	D	118	136	Right-handed alpha
Helix 77	77	D	157	173	Right-handed alpha
Helix 78	78	D	174	183	Right-handed alpha
Helix 79	79	D	185	189	Right-handed 310
Helix 80	80	D	193	197	Right-handed 310
Helix 81	81	D	214	244	Right-handed alpha
Helix 82	82	D	261	267	Right-handed alpha
Helix 83	83	D	283	297	Right-handed alpha
Helix 84	84	D	325	337	Right-handed alpha
Helix 85	85	D	352	356	Right-handed 310
Helix 86	86	D	370	387	Right-handed alpha
Helix 87	87	D	404	414	Right-handed alpha
Helix 88	88	D	422	436	Right-handed alpha
Helix 89	89	D	467	478	Right-handed alpha
Helix 90	90	D	503	505	Right-handed 310
Helix 91	91	D	506	511	Right-handed alpha
Helix 92	92	D	590	605	Right-handed alpha
Helix 93	93	E	16	20	Right-handed 310
Helix 94	94	E	21	36	Right-handed alpha
Helix 95	95	E	46	51	Right-handed alpha
Helix 96	96	E	59	72	Right-handed alpha
Helix 97	97	E	86	93	Right-handed alpha
Helix 98	98	E	94	97	Right-handed 310
Helix 99	99	E	118	137	Right-handed alpha
Helix 100	100	E	157	173	Right-handed alpha
Helix 101	101	E	174	183	Right-handed alpha
Helix 102	102	E	185	189	Right-handed 310
Helix 103	103	E	193	197	Right-handed 310
Helix 104	104	E	214	244	Right-handed alpha
Helix 105	105	E	261	268	Right-handed alpha
Helix 106	106	E	283	297	Right-handed alpha
Helix 107	107	E	325	337	Right-handed alpha
Helix 108	108	E	352	356	Right-handed 310
Helix 109	109	E	370	387	Right-handed alpha
Helix 110	110	E	404	414	Right-handed alpha
Helix 111	111	E	422	436	Right-handed alpha
Helix 112	112	E	449	453	Right-handed 310
Helix 113	113	E	467	478	Right-handed alpha
Helix 114	114	E	503	505	Right-handed 310
Helix 115	115	E	506	511	Right-handed alpha
Helix 116	116	E	590	605	Right-handed alpha
Helix 117	117	F	16	20	Right-handed 310
Helix 118	118	F	21	36	Right-handed alpha
Helix 119	119	F	46	51	Right-handed alpha
Helix 120	120	F	59	72	Right-handed alpha
Helix 121	121	F	86	93	Right-handed alpha
Helix 122	122	F	94	97	Right-handed 310
Helix 123	123	F	118	136	Right-handed alpha
Helix 124	124	F	157	173	Right-handed alpha
Helix 125	125	F	174	182	Right-handed alpha
Helix 126	126	F	185	189	Right-handed 310
Helix 127	127	F	193	197	Right-handed 310
Helix 128	128	F	214	244	Right-handed alpha
Helix 129	129	F	261	267	Right-handed alpha
Helix 130	130	F	283	297	Right-handed alpha
Helix 131	131	F	325	337	Right-handed alpha
Helix 132	132	F	352	356	Right-handed 310
Helix 133	133	F	370	387	Right-handed alpha
Helix 134	134	F	404	414	Right-handed alpha
Helix 135	135	F	422	436	Right-handed alpha
Helix 136	136	F	467	478	Right-handed alpha
Helix 137	137	F	503	505	Right-handed 310
Helix 138	138	F	506	511	Right-handed alpha
Helix 139	139	F	590	606	Right-handed alpha

There are 37 sheets in PDB entry 3TTY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	249	250	first strand
Strand 2	A	142	146	parallel
Strand 3	A	75	79	parallel
Strand 4	A	39	42	parallel
Strand 5	A	10	14	parallel
Strand 6	A	339	344	parallel
Strand 7	A	303	307	parallel
Strand 8	A	273	275	parallel
Strand 9	A	252	253	parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	206	207	first strand
Strand 2	A	211	212	anti-parallel

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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	441	444	first strand
Strand 2	A	399	402	parallel
Strand 3	A	455	458	parallel
Strand 4	A	481	485	parallel
Strand 5	A	580	585	parallel
Strand 6	A	570	577	anti-parallel
Strand 7	A	556	561	anti-parallel
Strand 8	A	525	530	anti-parallel
Strand 9	A	540	552	anti-parallel
Strand 10	A	512	519	anti-parallel

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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	441	444	first strand
Strand 2	A	399	402	parallel
Strand 3	A	455	458	parallel
Strand 4	A	481	485	parallel
Strand 5	A	580	585	parallel
Strand 6	A	570	577	anti-parallel
Strand 7	A	556	561	anti-parallel
Strand 8	A	525	530	anti-parallel
Strand 9	A	540	552	anti-parallel
Strand 10	A	587	589	anti-parallel

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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	617	624	first strand
Strand 2	A	627	634	anti-parallel
Strand 3	A	669	674	anti-parallel
Strand 4	A	649	651	anti-parallel
Strand 5	A	657	658	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	640	643	first strand
Strand 2	A	661	664	anti-parallel

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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	249	250	first strand
Strand 2	B	142	146	parallel
Strand 3	B	75	79	parallel
Strand 4	B	39	42	parallel
Strand 5	B	10	14	parallel
Strand 6	B	339	344	parallel
Strand 7	B	303	307	parallel
Strand 8	B	273	275	parallel
Strand 9	B	252	253	parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	206	207	first strand
Strand 2	B	211	212	anti-parallel

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There are 10 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	441	444	first strand
Strand 2	B	399	402	parallel
Strand 3	B	455	458	parallel
Strand 4	B	481	485	parallel
Strand 5	B	580	585	parallel
Strand 6	B	570	577	anti-parallel
Strand 7	B	556	561	anti-parallel
Strand 8	B	525	530	anti-parallel
Strand 9	B	540	552	anti-parallel
Strand 10	B	512	519	anti-parallel

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There are 10 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	441	444	first strand
Strand 2	B	399	402	parallel
Strand 3	B	455	458	parallel
Strand 4	B	481	485	parallel
Strand 5	B	580	585	parallel
Strand 6	B	570	577	anti-parallel
Strand 7	B	556	561	anti-parallel
Strand 8	B	525	530	anti-parallel
Strand 9	B	540	552	anti-parallel
Strand 10	B	587	589	anti-parallel

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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	617	624	first strand
Strand 2	B	627	634	anti-parallel
Strand 3	B	669	674	anti-parallel
Strand 4	B	649	651	anti-parallel
Strand 5	B	657	658	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	640	643	first strand
Strand 2	B	661	664	anti-parallel

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There are 9 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	249	250	first strand
Strand 2	C	142	146	parallel
Strand 3	C	75	79	parallel
Strand 4	C	39	42	parallel
Strand 5	C	10	14	parallel
Strand 6	C	339	344	parallel
Strand 7	C	303	307	parallel
Strand 8	C	273	275	parallel
Strand 9	C	252	253	parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	206	207	first strand
Strand 2	C	211	212	anti-parallel

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There are 10 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	441	444	first strand
Strand 2	C	399	402	parallel
Strand 3	C	455	458	parallel
Strand 4	C	481	485	parallel
Strand 5	C	580	585	parallel
Strand 6	C	570	577	anti-parallel
Strand 7	C	556	561	anti-parallel
Strand 8	C	525	530	anti-parallel
Strand 9	C	540	552	anti-parallel
Strand 10	C	512	519	anti-parallel

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There are 10 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	441	444	first strand
Strand 2	C	399	402	parallel
Strand 3	C	455	458	parallel
Strand 4	C	481	485	parallel
Strand 5	C	580	585	parallel
Strand 6	C	570	577	anti-parallel
Strand 7	C	556	561	anti-parallel
Strand 8	C	525	530	anti-parallel
Strand 9	C	540	552	anti-parallel
Strand 10	C	587	589	anti-parallel

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There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	617	624	first strand
Strand 2	C	627	634	anti-parallel
Strand 3	C	669	673	anti-parallel
Strand 4	C	649	651	anti-parallel
Strand 5	C	657	658	anti-parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	640	643	first strand
Strand 2	C	661	664	anti-parallel

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There are 9 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	249	250	first strand
Strand 2	D	142	146	parallel
Strand 3	D	75	79	parallel
Strand 4	D	39	42	parallel
Strand 5	D	10	14	parallel
Strand 6	D	339	344	parallel
Strand 7	D	303	307	parallel
Strand 8	D	273	275	parallel
Strand 9	D	252	253	parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	51	53	first strand
Strand 2	D	56	57	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	206	207	first strand
Strand 2	D	211	212	anti-parallel

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There are 10 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	441	444	first strand
Strand 2	D	399	402	parallel
Strand 3	D	455	458	parallel
Strand 4	D	481	485	parallel
Strand 5	D	580	585	parallel
Strand 6	D	570	577	anti-parallel
Strand 7	D	556	561	anti-parallel
Strand 8	D	525	530	anti-parallel
Strand 9	D	540	552	anti-parallel
Strand 10	D	512	519	anti-parallel

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There are 10 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	441	444	first strand
Strand 2	D	399	402	parallel
Strand 3	D	455	458	parallel
Strand 4	D	481	485	parallel
Strand 5	D	580	585	parallel
Strand 6	D	570	577	anti-parallel
Strand 7	D	556	561	anti-parallel
Strand 8	D	525	530	anti-parallel
Strand 9	D	540	552	anti-parallel
Strand 10	D	587	589	anti-parallel

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There are 5 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	617	624	first strand
Strand 2	D	627	634	anti-parallel
Strand 3	D	669	674	anti-parallel
Strand 4	D	649	651	anti-parallel
Strand 5	D	657	658	anti-parallel

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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	640	643	first strand
Strand 2	D	661	664	anti-parallel

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There are 9 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	249	250	first strand
Strand 2	E	142	146	parallel
Strand 3	E	75	79	parallel
Strand 4	E	39	42	parallel
Strand 5	E	10	14	parallel
Strand 6	E	339	344	parallel
Strand 7	E	303	307	parallel
Strand 8	E	273	275	parallel
Strand 9	E	252	253	parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	206	207	first strand
Strand 2	E	211	212	anti-parallel

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There are 10 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	441	444	first strand
Strand 2	E	399	402	parallel
Strand 3	E	455	458	parallel
Strand 4	E	481	485	parallel
Strand 5	E	580	585	parallel
Strand 6	E	570	577	anti-parallel
Strand 7	E	556	561	anti-parallel
Strand 8	E	526	530	anti-parallel
Strand 9	E	540	552	anti-parallel
Strand 10	E	512	519	anti-parallel

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There are 10 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	441	444	first strand
Strand 2	E	399	402	parallel
Strand 3	E	455	458	parallel
Strand 4	E	481	485	parallel
Strand 5	E	580	585	parallel
Strand 6	E	570	577	anti-parallel
Strand 7	E	556	561	anti-parallel
Strand 8	E	526	530	anti-parallel
Strand 9	E	540	552	anti-parallel
Strand 10	E	587	589	anti-parallel

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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	617	624	first strand
Strand 2	E	627	634	anti-parallel
Strand 3	E	669	674	anti-parallel
Strand 4	E	649	651	anti-parallel
Strand 5	E	657	658	anti-parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	640	643	first strand
Strand 2	E	661	664	anti-parallel

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There are 9 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	249	250	first strand
Strand 2	F	142	146	parallel
Strand 3	F	75	79	parallel
Strand 4	F	39	42	parallel
Strand 5	F	10	14	parallel
Strand 6	F	339	344	parallel
Strand 7	F	303	307	parallel
Strand 8	F	273	275	parallel
Strand 9	F	252	253	parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	206	207	first strand
Strand 2	F	211	212	anti-parallel

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There are 10 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	441	444	first strand
Strand 2	F	399	402	parallel
Strand 3	F	455	458	parallel
Strand 4	F	481	485	parallel
Strand 5	F	580	585	parallel
Strand 6	F	570	577	anti-parallel
Strand 7	F	556	561	anti-parallel
Strand 8	F	525	530	anti-parallel
Strand 9	F	540	552	anti-parallel
Strand 10	F	512	519	anti-parallel

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There are 10 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	441	444	first strand
Strand 2	F	399	402	parallel
Strand 3	F	455	458	parallel
Strand 4	F	481	485	parallel
Strand 5	F	580	585	parallel
Strand 6	F	570	577	anti-parallel
Strand 7	F	556	561	anti-parallel
Strand 8	F	525	530	anti-parallel
Strand 9	F	540	552	anti-parallel
Strand 10	F	587	589	anti-parallel

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There are 5 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	617	624	first strand
Strand 2	F	627	634	anti-parallel
Strand 3	F	669	674	anti-parallel
Strand 4	F	649	651	anti-parallel
Strand 5	F	657	658	anti-parallel

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There are 2 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	640	643	first strand
Strand 2	F	661	664	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3TTY

Analysis of interatomic Contacts of Structural Units in PDB entry:
3TTY