Analysis of interatomic Contacts of Structural Units in PDB entry:
3TV5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TV5 entry

There are 2 chains in PDB entry 3TV5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1480ALA 2195
B
 LEU 1480MET 2044
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 93 helices in PDB entry 3TV5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1489 1494Right-handed alpha
Helix 2
2
A
1494 1503Right-handed alpha
Helix 3
3
A
1507 1509Right-handed 310
Helix 4
4
A
1510 1527Right-handed alpha
Helix 5
5
A
1533 1535Right-handed 310
Helix 6
6
A
1591 1595Right-handed 310
Helix 7
7
A
1597 1615Right-handed alpha
Helix 8
8
A
1648 1651Right-handed 310
Helix 9
9
A
1659 1669Right-handed alpha
Helix 10
10
A
1671 1673Right-handed 310
Helix 11
11
A
1701 1720Right-handed alpha
Helix 12
12
A
1734 1743Right-handed alpha
Helix 13
13
A
1758 1767Right-handed alpha
Helix 14
14
A
1774 1779Right-handed alpha
Helix 15
15
A
1779 1784Right-handed alpha
Helix 16
16
A
1795 1808Right-handed alpha
Helix 17
17
A
1842 1849Right-handed alpha
Helix 18
18
A
1925 1941Right-handed alpha
Helix 19
19
A
1959 1965Right-handed alpha
Helix 20
20
A
1966 1980Right-handed alpha
Helix 21
21
A
1997 2002Right-handed alpha
Helix 22
22
A
2003 2008Right-handed 310
Helix 23
23
A
2026 2035Right-handed alpha
Helix 24
24
A
2036 2048Right-handed alpha
Helix 25
25
A
2074 2096Right-handed alpha
Helix 26
26
A
2099 2106Right-handed alpha
Helix 27
27
A
2114 2116Right-handed 310
Helix 28
28
A
2117 2142Right-handed alpha
Helix 29
29
A
2147 2157Right-handed alpha
Helix 30
30
A
2167 2189Right-handed alpha
Helix 31
31
B
1489 1494Right-handed alpha
Helix 32
32
B
1494 1503Right-handed alpha
Helix 33
33
B
1507 1509Right-handed 310
Helix 34
34
B
1510 1527Right-handed alpha
Helix 35
35
B
1533 1535Right-handed 310
Helix 36
36
B
1591 1595Right-handed 310
Helix 37
37
B
1597 1615Right-handed alpha
Helix 38
38
B
1648 1651Right-handed 310
Helix 39
39
B
1659 1669Right-handed alpha
Helix 40
40
B
1671 1673Right-handed 310
Helix 41
41
B
1701 1719Right-handed alpha
Helix 42
42
B
1734 1743Right-handed alpha
Helix 43
43
B
1758 1767Right-handed alpha
Helix 44
44
B
1774 1779Right-handed alpha
Helix 45
45
B
1779 1784Right-handed alpha
Helix 46
46
B
1795 1808Right-handed alpha
Helix 47
47
B
1842 1849Right-handed alpha
Helix 48
48
B
1925 1941Right-handed alpha
Helix 49
49
B
1959 1965Right-handed alpha
Helix 50
50
B
1966 1980Right-handed alpha
Helix 51
51
B
1997 2002Right-handed alpha
Helix 52
52
B
2003 2008Right-handed 310
Helix 53
53
B
2026 2035Right-handed alpha
Helix 54
54
B
2036 2048Right-handed alpha
Helix 55
55
B
2048 2054Right-handed alpha
Helix 56
56
B
2076 2096Right-handed alpha
Helix 57
57
B
2099 2106Right-handed alpha
Helix 58
58
B
2114 2116Right-handed 310
Helix 59
59
B
2117 2144Right-handed alpha
Helix 60
60
B
2147 2158Right-handed alpha
Helix 61
61
B
2167 2178Right-handed alpha
Helix 62
62
B
2178 2188Right-handed alpha
Helix 63
63
C
1493 1503Right-handed alpha
Helix 64
64
C
1507 1509Right-handed 310
Helix 65
65
C
1510 1527Right-handed alpha
Helix 66
66
C
1533 1535Right-handed 310
Helix 67
67
C
1591 1595Right-handed 310
Helix 68
68
C
1597 1615Right-handed alpha
Helix 69
69
C
1648 1651Right-handed 310
Helix 70
70
C
1659 1669Right-handed alpha
Helix 71
71
C
1671 1673Right-handed 310
Helix 72
72
C
1701 1719Right-handed alpha
Helix 73
73
C
1734 1743Right-handed alpha
Helix 74
74
C
1758 1767Right-handed alpha
Helix 75
75
C
1774 1779Right-handed alpha
Helix 76
76
C
1779 1784Right-handed alpha
Helix 77
77
C
1795 1808Right-handed alpha
Helix 78
78
C
1842 1849Right-handed alpha
Helix 79
79
C
1925 1941Right-handed alpha
Helix 80
80
C
1959 1965Right-handed alpha
Helix 81
81
C
1966 1980Right-handed alpha
Helix 82
82
C
1997 2002Right-handed alpha
Helix 83
83
C
2003 2008Right-handed 310
Helix 84
84
C
2026 2035Right-handed alpha
Helix 85
85
C
2036 2048Right-handed alpha
Helix 86
86
C
2048 2057Right-handed alpha
Helix 87
87
C
2076 2096Right-handed alpha
Helix 88
88
C
2099 2106Right-handed alpha
Helix 89
89
C
2114 2116Right-handed 310
Helix 90
90
C
2117 2142Right-handed alpha
Helix 91
91
C
2147 2158Right-handed alpha
Helix 92
92
C
2167 2178Right-handed alpha
Helix 93
93
C
2178 2191Right-handed alpha
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There are 19 sheets in PDB entry 3TV5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1550 1553first strand
Strand 2
A
1537 1544anti-parallel
Strand 3
A
1564 1573anti-parallel
Strand 4
A
1576 1587anti-parallel
Strand 5
A
1618 1622parallel
Strand 6
A
1724 1728parallel
Strand 7
A
1745 1749parallel
Strand 8
A
1791 1793parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1640 1643first strand
Strand 2
A
1653 1658anti-parallel
Strand 3
A
1685 1693anti-parallel
Strand 4
A
1675 1682anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1732 1733first strand
Strand 2
A
1754 1755parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1867 1869first strand
Strand 2
A
1877 1884anti-parallel
Strand 3
A
1887 1894anti-parallel
Strand 4
A
1947 1949parallel
Strand 5
A
1985 1989parallel
Strand 6
A
2012 2017parallel
Strand 7
A
2111 2113parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1899 1903first strand
Strand 2
A
1915 1919anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1994 1996first strand
Strand 2
A
2021 2023parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1550 1553first strand
Strand 2
B
1537 1544anti-parallel
Strand 3
B
1564 1573anti-parallel
Strand 4
B
1576 1587anti-parallel
Strand 5
B
1618 1622parallel
Strand 6
B
1724 1728parallel
Strand 7
B
1745 1749parallel
Strand 8
B
1791 1793parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1640 1643first strand
Strand 2
B
1653 1658anti-parallel
Strand 3
B
1685 1693anti-parallel
Strand 4
B
1675 1682anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1732 1733first strand
Strand 2
B
1754 1755parallel
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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1867 1869first strand
Strand 2
B
1877 1884anti-parallel
Strand 3
B
1887 1894anti-parallel
Strand 4
B
1947 1949parallel
Strand 5
B
1985 1989parallel
Strand 6
B
2012 2017parallel
Strand 7
B
2111 2113parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1899 1903first strand
Strand 2
B
1915 1919anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1923 1924first strand
Strand 2
B
1955 1956parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1994 1996first strand
Strand 2
B
2021 2023parallel
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There are 8 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1550 1553first strand
Strand 2
C
1537 1544anti-parallel
Strand 3
C
1564 1573anti-parallel
Strand 4
C
1576 1587anti-parallel
Strand 5
C
1618 1622parallel
Strand 6
C
1724 1728parallel
Strand 7
C
1745 1749parallel
Strand 8
C
1791 1793parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1640 1643first strand
Strand 2
C
1653 1658anti-parallel
Strand 3
C
1685 1693anti-parallel
Strand 4
C
1675 1682anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1732 1733first strand
Strand 2
C
1754 1755parallel
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There are 7 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1867 1869first strand
Strand 2
C
1877 1884anti-parallel
Strand 3
C
1887 1894anti-parallel
Strand 4
C
1947 1949parallel
Strand 5
C
1985 1989parallel
Strand 6
C
2012 2017parallel
Strand 7
C
2111 2113parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1899 1903first strand
Strand 2
C
1915 1919anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1994 1996first strand
Strand 2
C
2021 2023parallel
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