Analysis of interatomic Contacts of Structural Units in PDB entry:
3TX0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TX0 entry

There is 1 chain in PDB entry 3TX0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2LEU 392
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3TX0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 27Right-handed 310
Helix 2
2
A
32 41Right-handed alpha
Helix 3
3
A
46 53Right-handed alpha
Helix 4
4
A
53 58Right-handed alpha
Helix 5
5
A
84 93Right-handed alpha
Helix 6
6
A
109 121Right-handed alpha
Helix 7
7
A
131 147Right-handed alpha
Helix 8
8
A
169 184Right-handed alpha
Helix 9
9
A
186 190Right-handed 310
Helix 10
10
A
223 231Right-handed alpha
Helix 11
11
A
240 245Right-handed alpha
Helix 12
12
A
258 271Right-handed alpha
Helix 13
13
A
283 289Right-handed alpha
Helix 14
14
A
294 316Right-handed alpha
Helix 15
15
A
367 378Right-handed alpha
Helix 16
16
A
388 392Right-handed 310
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There are 3 sheets in PDB entry 3TX0. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 76first strand
Strand 2
A
344 349anti-parallel
Strand 3
A
320 325anti-parallel
Strand 4
A
6 12parallel
Strand 5
A
276 282parallel
Strand 6
A
234 238parallel
Strand 7
A
252 254parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 129first strand
Strand 2
A
149 153parallel
Strand 3
A
158 164anti-parallel
Strand 4
A
193 202parallel
Strand 5
A
205 208anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 129first strand
Strand 2
A
149 153parallel
Strand 3
A
158 164anti-parallel
Strand 4
A
193 202parallel
Strand 5
A
213 216anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il