Analysis of interatomic Contacts of Structural Units in PDB entry:
3TY0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TY0 entry

There are 2 chains in PDB entry 3TY0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 201TYR 477
B
 GLY 701TYR 977
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 28 helices in PDB entry 3TY0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
205 226Right-handed alpha
Helix 2
2
A
229 238Right-handed alpha
Helix 3
3
A
251 262Right-handed alpha
Helix 4
4
A
276 303Right-handed alpha
Helix 5
5
A
305 309Right-handed 310
Helix 6
6
A
310 332Right-handed alpha
Helix 7
7
A
342 344Right-handed 310
Helix 8
8
A
350 355Right-handed alpha
Helix 9
9
A
357 361Right-handed 310
Helix 10
10
A
364 376Right-handed alpha
Helix 11
11
A
380 393Right-handed alpha
Helix 12
12
A
402 425Right-handed alpha
Helix 13
13
A
430 438Right-handed alpha
Helix 14
14
A
438 460Right-handed alpha
Helix 15
15
A
466 474Right-handed alpha
Helix 16
16
B
709 726Right-handed alpha
Helix 17
17
B
729 739Right-handed alpha
Helix 18
18
B
751 761Right-handed alpha
Helix 19
19
B
776 802Right-handed alpha
Helix 20
20
B
805 809Right-handed 310
Helix 21
21
B
810 832Right-handed alpha
Helix 22
22
B
850 855Right-handed alpha
Helix 23
23
B
859 863Right-handed 310
Helix 24
24
B
864 876Right-handed alpha
Helix 25
25
B
880 893Right-handed alpha
Helix 26
26
B
902 925Right-handed alpha
Helix 27
27
B
930 956Right-handed alpha
Helix 28
28
B
966 973Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 3TY0. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 249first strand
Strand 2
A
346 349parallel
Strand 3
A
338 341anti-parallel
Strand 4
A
334 335anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
747 749first strand
Strand 2
B
846 849parallel
Strand 3
B
838 841anti-parallel
Strand 4
B
834 835anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il