Analysis of interatomic Contacts of Structural Units in PDB entry:
3TY2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TY2 entry

There are 2 chains in PDB entry 3TY2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 11MSE 261
B
 LYS 11MSE 261
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 3TY2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 35Right-handed alpha
Helix 2
2
A
77 86Right-handed alpha
Helix 3
3
A
107 113Right-handed 310
Helix 4
4
A
114 123Right-handed alpha
Helix 5
5
A
142 160Right-handed alpha
Helix 6
6
A
176 180Right-handed 310
Helix 7
7
A
224 231Right-handed alpha
Helix 8
8
A
245 247Right-handed 310
Helix 9
9
A
248 260Right-handed alpha
Helix 10
10
B
24 35Right-handed alpha
Helix 11
11
B
77 86Right-handed alpha
Helix 12
12
B
107 113Right-handed 310
Helix 13
13
B
114 123Right-handed alpha
Helix 14
14
B
124 126Right-handed 310
Helix 15
15
B
142 160Right-handed alpha
Helix 16
16
B
176 180Right-handed 310
Helix 17
17
B
224 231Right-handed alpha
Helix 18
18
B
245 247Right-handed 310
Helix 19
19
B
248 258Right-handed alpha
Helix 20
20
B
259 261Right-handed 310
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There are 2 sheets in PDB entry 3TY2. Click on sheet of interest to get list of strands forming it: A, B,

There are 11 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 185first strand
Strand 2
A
233 238parallel
Strand 3
A
167 172anti-parallel
Strand 4
A
130 135parallel
Strand 5
A
96 103parallel
Strand 6
A
13 17parallel
Strand 7
A
39 45parallel
Strand 8
A
72 74parallel
Strand 9
A
62 66anti-parallel
Strand 10
B
207 210anti-parallel
Strand 11
B
198 201anti-parallel
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There are 11 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 201first strand
Strand 2
A
207 210anti-parallel
Strand 3
B
62 66anti-parallel
Strand 4
B
72 74anti-parallel
Strand 5
B
39 45parallel
Strand 6
B
13 17parallel
Strand 7
B
96 103parallel
Strand 8
B
130 135parallel
Strand 9
B
167 172parallel
Strand 10
B
234 239anti-parallel
Strand 11
B
183 185parallel
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