Analysis of interatomic Contacts of Structural Units in PDB entry:
3TY6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TY6 entry

There are 6 chains in PDB entry 3TY6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3LEU 180
B
 ASN 3LEU 180
C
 HIS 5LEU 180
D
 ASN 3LEU 180
E
 ASN 3LEU 180
F
 ASN 3LEU 180
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 29 helices in PDB entry 3TY6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 48Right-handed 310
Helix 2
2
A
56 74Right-handed alpha
Helix 3
3
A
77 92Right-handed alpha
Helix 4
4
A
132 147Right-handed alpha
Helix 5
5
A
148 151Right-handed 310
Helix 6
6
A
152 168Right-handed alpha
Helix 7
7
B
56 74Right-handed alpha
Helix 8
8
B
77 92Right-handed alpha
Helix 9
9
B
92 97Right-handed alpha
Helix 10
10
B
132 147Right-handed alpha
Helix 11
11
B
152 168Right-handed alpha
Helix 12
12
C
56 74Right-handed alpha
Helix 13
13
C
77 92Right-handed alpha
Helix 14
14
C
132 147Right-handed alpha
Helix 15
15
C
148 151Right-handed 310
Helix 16
16
C
152 168Right-handed alpha
Helix 17
17
D
56 75Right-handed alpha
Helix 18
18
D
77 92Right-handed alpha
Helix 19
19
D
132 147Right-handed alpha
Helix 20
20
D
152 168Right-handed alpha
Helix 21
21
E
56 75Right-handed alpha
Helix 22
22
E
77 92Right-handed alpha
Helix 23
23
E
132 147Right-handed alpha
Helix 24
24
E
152 168Right-handed alpha
Helix 25
25
F
56 74Right-handed alpha
Helix 26
26
F
77 92Right-handed alpha
Helix 27
27
F
94 98Right-handed 310
Helix 28
28
F
132 147Right-handed alpha
Helix 29
29
F
152 168Right-handed alpha
Back to top of page

There are 18 sheets in PDB entry 3TY6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
26 28anti-parallel
Strand 3
A
32 35anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 130first strand
Strand 2
A
8 14anti-parallel
Strand 3
A
17 23anti-parallel
Strand 4
A
175 179anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 44first strand
Strand 2
A
49 53anti-parallel
Strand 3
A
102 105anti-parallel
Strand 4
A
110 113anti-parallel
Strand 5
A
119 120anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
126 130first strand
Strand 2
B
8 14anti-parallel
Strand 3
B
17 23anti-parallel
Strand 4
B
175 179anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 28first strand
Strand 2
B
32 33anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 44first strand
Strand 2
B
49 53anti-parallel
Strand 3
B
102 105anti-parallel
Strand 4
B
110 113anti-parallel
Strand 5
B
119 120anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
126 129first strand
Strand 2
C
9 14anti-parallel
Strand 3
C
17 23anti-parallel
Strand 4
C
175 179anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 28first strand
Strand 2
C
32 35anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
41 44first strand
Strand 2
C
49 53anti-parallel
Strand 3
C
102 105anti-parallel
Strand 4
C
110 113anti-parallel
Strand 5
C
119 120anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
126 129first strand
Strand 2
D
9 13anti-parallel
Strand 3
D
18 23anti-parallel
Strand 4
D
175 180anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
26 28first strand
Strand 2
D
32 35anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
41 44first strand
Strand 2
D
49 53anti-parallel
Strand 3
D
102 105anti-parallel
Strand 4
D
110 113anti-parallel
Strand 5
D
119 120anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
4 5first strand
Strand 2
E
26 28anti-parallel
Strand 3
E
32 35anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
126 130first strand
Strand 2
E
8 14anti-parallel
Strand 3
E
17 23anti-parallel
Strand 4
E
175 179anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
41 44first strand
Strand 2
E
49 53anti-parallel
Strand 3
E
101 105anti-parallel
Strand 4
E
110 114anti-parallel
Strand 5
E
119 120anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
126 129first strand
Strand 2
F
9 14anti-parallel
Strand 3
F
17 23anti-parallel
Strand 4
F
175 179anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
26 28first strand
Strand 2
F
32 35anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
41 44first strand
Strand 2
F
49 53anti-parallel
Strand 3
F
102 105anti-parallel
Strand 4
F
110 113anti-parallel
Strand 5
F
119 120anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il