Analysis of interatomic Contacts of Structural Units in PDB entry:
3TY7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TY7 entry

There are 2 chains in PDB entry 3TY7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0LYS 475
B
 ALA 0LYS 475
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 3TY7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
40 60Right-handed alpha
Helix 2
2
A
62 80Right-handed alpha
Helix 3
3
A
80 93Right-handed alpha
Helix 4
4
A
95 102Right-handed alpha
Helix 5
5
A
102 121Right-handed alpha
Helix 6
6
A
150 164Right-handed alpha
Helix 7
7
A
176 190Right-handed alpha
Helix 8
8
A
206 213Right-handed alpha
Helix 9
9
A
224 229Right-handed alpha
Helix 10
10
A
259 273Right-handed alpha
Helix 11
11
A
274 277Right-handed 310
Helix 12
12
A
291 305Right-handed alpha
Helix 13
13
A
323 341Right-handed alpha
Helix 14
14
A
373 378Right-handed alpha
Helix 15
15
A
392 401Right-handed alpha
Helix 16
16
A
415 426Right-handed alpha
Helix 17
17
A
461 463Right-handed 310
Helix 18
18
B
40 60Right-handed alpha
Helix 19
19
B
62 80Right-handed alpha
Helix 20
20
B
80 93Right-handed alpha
Helix 21
21
B
95 102Right-handed alpha
Helix 22
22
B
102 118Right-handed alpha
Helix 23
23
B
150 164Right-handed alpha
Helix 24
24
B
176 189Right-handed alpha
Helix 25
25
B
206 213Right-handed alpha
Helix 26
26
B
224 235Right-handed alpha
Helix 27
27
B
259 273Right-handed alpha
Helix 28
28
B
274 277Right-handed 310
Helix 29
29
B
291 305Right-handed alpha
Helix 30
30
B
323 341Right-handed alpha
Helix 31
31
B
373 378Right-handed alpha
Helix 32
32
B
392 402Right-handed alpha
Helix 33
33
B
415 426Right-handed alpha
Helix 34
34
B
460 463Right-handed 310
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There are 8 sheets in PDB entry 3TY7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
32 37parallel
Strand 3
A
21 25anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 9first strand
Strand 2
A
12 15anti-parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 127first strand
Strand 2
A
130 136anti-parallel
Strand 3
A
465 471anti-parallel
Strand 4
B
430 433parallel
Strand 5
B
408 412parallel
Strand 6
B
251 254parallel
Strand 7
B
284 288parallel
Strand 8
B
384 390parallel
Strand 9
B
364 367parallel
Strand 10
B
343 346anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 198first strand
Strand 2
A
167 170parallel
Strand 3
A
140 143parallel
Strand 4
A
218 221parallel
Strand 5
A
241 243parallel
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There are 10 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
343 346first strand
Strand 2
A
364 367anti-parallel
Strand 3
A
384 390parallel
Strand 4
A
284 288parallel
Strand 5
A
251 254parallel
Strand 6
A
408 412parallel
Strand 7
A
430 433parallel
Strand 8
B
465 471parallel
Strand 9
B
130 136anti-parallel
Strand 10
B
124 127anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 4first strand
Strand 2
B
32 37parallel
Strand 3
B
21 25anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 9first strand
Strand 2
B
12 15anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
196 198first strand
Strand 2
B
167 170parallel
Strand 3
B
140 143parallel
Strand 4
B
218 222parallel
Strand 5
B
241 245parallel
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