Analysis of interatomic Contacts of Structural Units in PDB entry:
3TZC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TZC entry

There are 4 chains in PDB entry 3TZC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2TYR 246
B
 SER 2TYR 246
C
 SER 2TYR 246
D
 MET 1TYR 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 35 helices in PDB entry 3TZC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 32Right-handed alpha
Helix 2
2
A
42 54Right-handed alpha
Helix 3
3
A
66 82Right-handed alpha
Helix 4
4
A
103 115Right-handed alpha
Helix 5
5
A
115 133Right-handed alpha
Helix 6
6
A
160 174Right-handed alpha
Helix 7
7
A
200 206Right-handed alpha
Helix 8
8
A
215 227Right-handed alpha
Helix 9
9
A
228 232Right-handed 310
Helix 10
10
B
19 32Right-handed alpha
Helix 11
11
B
42 54Right-handed alpha
Helix 12
12
B
66 82Right-handed alpha
Helix 13
13
B
108 133Right-handed alpha
Helix 14
14
B
154 174Right-handed alpha
Helix 15
15
B
200 206Right-handed alpha
Helix 16
16
B
215 228Right-handed alpha
Helix 17
17
B
229 232Right-handed 310
Helix 18
18
C
19 32Right-handed alpha
Helix 19
19
C
42 54Right-handed alpha
Helix 20
20
C
66 82Right-handed alpha
Helix 21
21
C
98 102Right-handed 310
Helix 22
22
C
103 115Right-handed alpha
Helix 23
23
C
115 133Right-handed alpha
Helix 24
24
C
160 174Right-handed alpha
Helix 25
25
C
200 206Right-handed alpha
Helix 26
26
C
215 227Right-handed alpha
Helix 27
27
C
228 232Right-handed 310
Helix 28
28
D
19 32Right-handed alpha
Helix 29
29
D
42 54Right-handed alpha
Helix 30
30
D
66 82Right-handed alpha
Helix 31
31
D
107 133Right-handed alpha
Helix 32
32
D
154 174Right-handed alpha
Helix 33
33
D
198 206Right-handed alpha
Helix 34
34
D
215 228Right-handed alpha
Helix 35
35
D
229 232Right-handed 310
Back to top of page

There are 4 sheets in PDB entry 3TZC. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 61first strand
Strand 2
A
35 40parallel
Strand 3
A
11 14parallel
Strand 4
A
86 89parallel
Strand 5
A
135 140parallel
Strand 6
A
178 185parallel
Strand 7
A
238 241parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 61first strand
Strand 2
B
35 40parallel
Strand 3
B
11 14parallel
Strand 4
B
86 89parallel
Strand 5
B
135 140parallel
Strand 6
B
178 185parallel
Strand 7
B
238 241parallel
Back to list of sheets
Back to top of page

There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
57 61first strand
Strand 2
C
35 40parallel
Strand 3
C
11 14parallel
Strand 4
C
86 89parallel
Strand 5
C
135 139parallel
Strand 6
C
178 185parallel
Strand 7
C
238 241parallel
Back to list of sheets
Back to top of page

There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
57 61first strand
Strand 2
D
35 40parallel
Strand 3
D
11 14parallel
Strand 4
D
86 90parallel
Strand 5
D
135 140parallel
Strand 6
D
178 185parallel
Strand 7
D
238 241parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il