Analysis of interatomic Contacts of Structural Units in PDB entry:
3TZE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TZE entry

There are 2 chains in PDB entry 3TZE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 19PHE 385
B
 ASP 24ASN 383
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 3TZE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 31Right-handed alpha
Helix 2
2
A
38 50Right-handed alpha
Helix 3
3
A
54 59Right-handed alpha
Helix 4
4
A
67 77Right-handed alpha
Helix 5
5
A
95 97Right-handed 310
Helix 6
6
A
98 113Right-handed alpha
Helix 7
7
A
121 129Right-handed alpha
Helix 8
8
A
132 149Right-handed alpha
Helix 9
9
A
153 155Right-handed 310
Helix 10
10
A
162 166Right-handed alpha
Helix 11
11
A
169 179Right-handed alpha
Helix 12
12
A
181 190Right-handed alpha
Helix 13
13
A
196 208Right-handed alpha
Helix 14
14
A
209 215Right-handed 310
Helix 15
15
A
232 244Right-handed alpha
Helix 16
16
A
245 247Right-handed 310
Helix 17
17
A
273 277Right-handed 310
Helix 18
18
A
283 295Right-handed alpha
Helix 19
19
A
312 315Right-handed 310
Helix 20
20
A
316 326Right-handed alpha
Helix 21
21
A
328 341Right-handed alpha
Helix 22
22
A
345 371Right-handed alpha
Helix 23
23
A
372 381Right-handed alpha
Helix 24
24
A
382 385Right-handed 310
Helix 25
25
B
25 33Right-handed alpha
Helix 26
26
B
38 50Right-handed alpha
Helix 27
27
B
54 59Right-handed alpha
Helix 28
28
B
67 77Right-handed alpha
Helix 29
29
B
95 98Right-handed 310
Helix 30
30
B
99 113Right-handed alpha
Helix 31
31
B
121 129Right-handed alpha
Helix 32
32
B
132 149Right-handed alpha
Helix 33
33
B
153 155Right-handed 310
Helix 34
34
B
162 166Right-handed alpha
Helix 35
35
B
169 180Right-handed alpha
Helix 36
36
B
181 190Right-handed alpha
Helix 37
37
B
196 208Right-handed alpha
Helix 38
38
B
209 215Right-handed 310
Helix 39
39
B
232 247Right-handed alpha
Helix 40
40
B
283 295Right-handed alpha
Helix 41
41
B
316 326Right-handed alpha
Helix 42
42
B
328 341Right-handed alpha
Helix 43
43
B
345 369Right-handed alpha
Helix 44
44
B
372 381Right-handed alpha
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There are 2 sheets in PDB entry 3TZE. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 36first strand
Strand 2
A
62 66anti-parallel
Strand 3
A
252 256anti-parallel
Strand 4
A
223 229parallel
Strand 5
A
81 87parallel
Strand 6
A
116 120parallel
Strand 7
A
157 161parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 36first strand
Strand 2
B
62 66anti-parallel
Strand 3
B
252 256anti-parallel
Strand 4
B
223 229parallel
Strand 5
B
81 87parallel
Strand 6
B
116 120parallel
Strand 7
B
157 161parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il