Analysis of interatomic Contacts of Structural Units in PDB entry:
3TZG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TZG entry

There are 2 chains in PDB entry 3TZG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 28LEU 272
B
 THR 29LEU 272
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 3TZG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
191 196Right-handed 310
Helix 2
2
A
201 210Right-handed alpha
Helix 3
3
B
191 196Right-handed 310
Helix 4
4
B
201 210Right-handed alpha
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There are 4 sheets in PDB entry 3TZG. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 17 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 36first strand
Strand 2
A
44 49anti-parallel
Strand 3
A
55 58anti-parallel
Strand 4
A
61 66anti-parallel
Strand 5
A
69 72anti-parallel
Strand 6
A
84 92anti-parallel
Strand 7
A
95 106anti-parallel
Strand 8
A
111 123anti-parallel
Strand 9
A
126 135anti-parallel
Strand 10
A
141 151anti-parallel
Strand 11
A
157 166anti-parallel
Strand 12
A
171 179anti-parallel
Strand 13
A
224 229anti-parallel
Strand 14
A
234 245anti-parallel
Strand 15
A
248 256anti-parallel
Strand 16
A
260 268anti-parallel
Strand 17
A
33 36anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 185first strand
Strand 2
A
220 221anti-parallel
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There are 17 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 36first strand
Strand 2
B
44 49anti-parallel
Strand 3
B
55 58anti-parallel
Strand 4
B
61 66anti-parallel
Strand 5
B
69 72anti-parallel
Strand 6
B
84 92anti-parallel
Strand 7
B
95 106anti-parallel
Strand 8
B
111 123anti-parallel
Strand 9
B
126 135anti-parallel
Strand 10
B
141 151anti-parallel
Strand 11
B
157 166anti-parallel
Strand 12
B
171 179anti-parallel
Strand 13
B
224 229anti-parallel
Strand 14
B
234 245anti-parallel
Strand 15
B
248 256anti-parallel
Strand 16
B
260 268anti-parallel
Strand 17
B
33 36anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
184 185first strand
Strand 2
B
220 221anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il