Analysis of interatomic Contacts of Structural Units in PDB entry:
3TZW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TZW entry

There are 2 chains in PDB entry 3TZW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 596PHE 1062
D
 ASP 2VAL 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 21 helices in PDB entry 3TZW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
601 617Right-handed alpha
Helix 2
2
A
633 650Right-handed alpha
Helix 3
3
A
650 655Right-handed alpha
Helix 4
4
A
657 667Right-handed alpha
Helix 5
5
A
681 694Right-handed alpha
Helix 6
6
A
727 734Right-handed alpha
Helix 7
7
A
734 753Right-handed alpha
Helix 8
8
A
755 762Right-handed alpha
Helix 9
9
A
768 790Right-handed alpha
Helix 10
10
A
803 811Right-handed alpha
Helix 11
11
A
815 836Right-handed alpha
Helix 12
12
A
851 857Right-handed alpha
Helix 13
13
A
881 895Right-handed alpha
Helix 14
14
A
910 915Right-handed 310
Helix 15
15
A
916 924Right-handed alpha
Helix 16
16
A
955 965Right-handed alpha
Helix 17
17
A
968 979Right-handed alpha
Helix 18
18
A
991 1004Right-handed alpha
Helix 19
19
A
1020 1036Right-handed alpha
Helix 20
20
A
1041 1045Right-handed 310
Helix 21
21
A
1050 1054Right-handed 310
Back to top of page

There are 3 sheets in PDB entry 3TZW. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
625 631first strand
Strand 2
A
673 679anti-parallel
Strand 3
A
701 704anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
945 946first strand
Strand 2
A
935 937anti-parallel
Strand 3
A
796 799parallel
Strand 4
A
713 716parallel
Strand 5
A
983 987parallel
Strand 6
A
1010 1012parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
866 872first strand
Strand 2
A
875 880anti-parallel
Strand 3
A
844 848anti-parallel
Strand 4
A
899 901anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il