Analysis of interatomic Contacts of Structural Units in PDB entry:
3U1V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3U1V entry

There are 4 chains in PDB entry 3U1V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1ARG 327
B
 MSE 1ARG 327
C
 MSE 1ARG 327
D
 MSE 1ARG 327
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 3U1V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 22Right-handed alpha
Helix 2
2
A
22 30Right-handed alpha
Helix 3
3
A
40 45Right-handed alpha
Helix 4
4
A
50 69Right-handed alpha
Helix 5
5
A
81 83Right-handed 310
Helix 6
6
A
84 95Right-handed alpha
Helix 7
7
A
98 104Right-handed alpha
Helix 8
8
A
105 113Right-handed alpha
Helix 9
9
A
119 135Right-handed alpha
Helix 10
10
A
147 164Right-handed alpha
Helix 11
11
A
209 219Right-handed alpha
Helix 12
12
A
235 250Right-handed alpha
Helix 13
13
A
252 260Right-handed alpha
Helix 14
14
A
264 291Right-handed alpha
Helix 15
15
A
294 323Right-handed alpha
Helix 16
16
B
15 22Right-handed alpha
Helix 17
17
B
25 33Right-handed alpha
Helix 18
18
B
40 45Right-handed alpha
Helix 19
19
B
50 69Right-handed alpha
Helix 20
20
B
81 83Right-handed 310
Helix 21
21
B
84 97Right-handed alpha
Helix 22
22
B
98 104Right-handed alpha
Helix 23
23
B
105 112Right-handed alpha
Helix 24
24
B
119 124Right-handed alpha
Helix 25
25
B
125 135Right-handed alpha
Helix 26
26
B
147 166Right-handed alpha
Helix 27
27
B
199 203Right-handed 310
Helix 28
28
B
209 219Right-handed alpha
Helix 29
29
B
235 250Right-handed alpha
Helix 30
30
B
252 260Right-handed alpha
Helix 31
31
B
264 292Right-handed alpha
Helix 32
32
B
294 323Right-handed alpha
Helix 33
33
C
15 22Right-handed alpha
Helix 34
34
C
22 33Right-handed alpha
Helix 35
35
C
40 45Right-handed alpha
Helix 36
36
C
50 69Right-handed alpha
Helix 37
37
C
81 83Right-handed 310
Helix 38
38
C
84 97Right-handed alpha
Helix 39
39
C
98 104Right-handed alpha
Helix 40
40
C
105 111Right-handed alpha
Helix 41
41
C
124 136Right-handed alpha
Helix 42
42
C
147 166Right-handed alpha
Helix 43
43
C
209 219Right-handed alpha
Helix 44
44
C
235 250Right-handed alpha
Helix 45
45
C
252 260Right-handed alpha
Helix 46
46
C
267 292Right-handed alpha
Helix 47
47
C
294 323Right-handed alpha
Helix 48
48
D
15 22Right-handed alpha
Helix 49
49
D
22 33Right-handed alpha
Helix 50
50
D
40 45Right-handed alpha
Helix 51
51
D
50 69Right-handed alpha
Helix 52
52
D
81 83Right-handed 310
Helix 53
53
D
84 97Right-handed alpha
Helix 54
54
D
98 104Right-handed alpha
Helix 55
55
D
105 112Right-handed alpha
Helix 56
56
D
119 124Right-handed alpha
Helix 57
57
D
124 136Right-handed alpha
Helix 58
58
D
147 166Right-handed alpha
Helix 59
59
D
211 215Right-handed 310
Helix 60
60
D
241 249Right-handed alpha
Helix 61
61
D
277 279Right-handed 310
Helix 62
62
D
280 292Right-handed alpha
Helix 63
63
D
294 323Right-handed alpha
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There are 9 sheets in PDB entry 3U1V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 8first strand
Strand 2
A
34 39parallel
Strand 3
A
75 79parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 141first strand
Strand 2
A
173 174parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 185first strand
Strand 2
A
188 192anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 8first strand
Strand 2
B
34 39parallel
Strand 3
B
75 79parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
140 142first strand
Strand 2
B
173 175parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 8first strand
Strand 2
C
34 39parallel
Strand 3
C
76 79parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
140 142first strand
Strand 2
C
173 175parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 8first strand
Strand 2
D
34 39parallel
Strand 3
D
75 79parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
140 142first strand
Strand 2
D
173 175parallel
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