Analysis of interatomic Contacts of Structural Units in PDB entry:
3U2H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3U2H entry

There is 1 chain in PDB entry 3U2H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 297GLU 566
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 3U2H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
363 366Right-handed 310
Helix 2
2
A
500 503Right-handed 310
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There are 7 sheets in PDB entry 3U2H. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 299first strand
Strand 2
A
560 565anti-parallel
Strand 3
A
303 304anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 299first strand
Strand 2
A
560 565anti-parallel
Strand 3
A
547 551anti-parallel
Strand 4
A
539 544anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
309 311first strand
Strand 2
A
330 334anti-parallel
Strand 3
A
347 352anti-parallel
Strand 4
A
524 528anti-parallel
Strand 5
A
517 521anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 342first strand
Strand 2
A
533 534anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 362first strand
Strand 2
A
367 375anti-parallel
Strand 3
A
378 382anti-parallel
Strand 4
A
390 392anti-parallel
Strand 5
A
504 505anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
394 404first strand
Strand 2
A
490 498anti-parallel
Strand 3
A
471 481anti-parallel
Strand 4
A
457 462anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 413first strand
Strand 2
A
416 424anti-parallel
Strand 3
A
428 436anti-parallel
Strand 4
A
440 446anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il