Analysis of interatomic Contacts of Structural Units in PDB entry:
3U3F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3U3F entry

There are 10 chains in PDB entry 3U3F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 876HIS 1005
B
 ASP 877HIS 1005
C
 ASP 877ASN 1002
D
 ASP 877ASN 1002
E
 SER 262LEU 274
F
 SER 262LEU 274
G
 SER 262SER 273
H
 SER 262SER 275
I
 GLU 266SER 275
J
 GLU 266SER 275
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 3U3F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
878 896Right-handed alpha
Helix 2
2
A
902 904Right-handed 310
Helix 3
3
A
905 928Right-handed alpha
Helix 4
4
A
932 963Right-handed alpha
Helix 5
5
A
968 1005Right-handed alpha
Helix 6
6
B
878 898Right-handed alpha
Helix 7
7
B
902 904Right-handed 310
Helix 8
8
B
905 926Right-handed alpha
Helix 9
9
B
927 931Right-handed 310
Helix 10
10
B
932 963Right-handed alpha
Helix 11
11
B
968 1005Right-handed alpha
Helix 12
12
C
878 898Right-handed alpha
Helix 13
13
C
902 926Right-handed alpha
Helix 14
14
C
927 931Right-handed 310
Helix 15
15
C
932 963Right-handed alpha
Helix 16
16
C
968 1002Right-handed alpha
Helix 17
17
D
878 898Right-handed alpha
Helix 18
18
D
902 928Right-handed alpha
Helix 19
19
D
932 963Right-handed alpha
Helix 20
20
D
968 1002Right-handed alpha
Helix 21
21
E
263 273Right-handed alpha
Helix 22
22
F
263 273Right-handed alpha
Helix 23
23
G
263 273Right-handed alpha
Helix 24
24
H
263 274Right-handed alpha
Helix 25
25
I
267 274Right-handed alpha
Helix 26
26
J
267 275Right-handed alpha
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There are no sheets in PDB entry 3U3F
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il