Analysis of interatomic Contacts of Structural Units in PDB entry:
3U41


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3U41 entry

There are 7 chains in PDB entry 3U41 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 204
B
 MET 1ARG 204
C
 MET 1ARG 204
D
 MET 1ARG 204
E
 MET 1ARG 204
F
 MET 1ARG 204
G
 THR 2ASN 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 97 helices in PDB entry 3U41. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 7Right-handed 310
Helix 2
2
A
9 23Right-handed alpha
Helix 3
3
A
30 38Right-handed alpha
Helix 4
4
A
41 45Right-handed 310
Helix 5
5
A
49 61Right-handed alpha
Helix 6
6
A
67 77Right-handed alpha
Helix 7
7
A
88 93Right-handed alpha
Helix 8
8
A
100 113Right-handed alpha
Helix 9
9
A
127 141Right-handed alpha
Helix 10
10
A
143 155Right-handed alpha
Helix 11
11
A
155 170Right-handed alpha
Helix 12
12
A
172 193Right-handed alpha
Helix 13
13
B
3 7Right-handed 310
Helix 14
14
B
9 23Right-handed alpha
Helix 15
15
B
30 38Right-handed alpha
Helix 16
16
B
41 46Right-handed alpha
Helix 17
17
B
49 61Right-handed alpha
Helix 18
18
B
67 77Right-handed alpha
Helix 19
19
B
88 93Right-handed alpha
Helix 20
20
B
100 113Right-handed alpha
Helix 21
21
B
127 141Right-handed alpha
Helix 22
22
B
143 155Right-handed alpha
Helix 23
23
B
155 170Right-handed alpha
Helix 24
24
B
172 192Right-handed alpha
Helix 25
25
C
3 7Right-handed 310
Helix 26
26
C
9 23Right-handed alpha
Helix 27
27
C
30 38Right-handed alpha
Helix 28
28
C
41 45Right-handed 310
Helix 29
29
C
49 61Right-handed alpha
Helix 30
30
C
67 77Right-handed alpha
Helix 31
31
C
88 93Right-handed alpha
Helix 32
32
C
100 113Right-handed alpha
Helix 33
33
C
127 141Right-handed alpha
Helix 34
34
C
143 155Right-handed alpha
Helix 35
35
C
155 170Right-handed alpha
Helix 36
36
C
172 191Right-handed alpha
Helix 37
37
D
3 7Right-handed 310
Helix 38
38
D
9 23Right-handed alpha
Helix 39
39
D
30 38Right-handed alpha
Helix 40
40
D
41 45Right-handed 310
Helix 41
41
D
49 61Right-handed alpha
Helix 42
42
D
67 77Right-handed alpha
Helix 43
43
D
87 93Right-handed alpha
Helix 44
44
D
100 113Right-handed alpha
Helix 45
45
D
127 141Right-handed alpha
Helix 46
46
D
143 155Right-handed alpha
Helix 47
47
D
155 170Right-handed alpha
Helix 48
48
D
172 192Right-handed alpha
Helix 49
49
E
3 7Right-handed 310
Helix 50
50
E
9 23Right-handed alpha
Helix 51
51
E
30 38Right-handed alpha
Helix 52
52
E
41 46Right-handed alpha
Helix 53
53
E
49 61Right-handed alpha
Helix 54
54
E
67 77Right-handed alpha
Helix 55
55
E
87 93Right-handed alpha
Helix 56
56
E
100 113Right-handed alpha
Helix 57
57
E
127 141Right-handed alpha
Helix 58
58
E
143 155Right-handed alpha
Helix 59
59
E
155 170Right-handed alpha
Helix 60
60
E
172 193Right-handed alpha
Helix 61
61
F
3 7Right-handed 310
Helix 62
62
F
9 23Right-handed alpha
Helix 63
63
F
30 38Right-handed alpha
Helix 64
64
F
41 46Right-handed alpha
Helix 65
65
F
49 60Right-handed alpha
Helix 66
66
F
67 77Right-handed alpha
Helix 67
67
F
87 93Right-handed alpha
Helix 68
68
F
100 114Right-handed alpha
Helix 69
69
F
127 141Right-handed alpha
Helix 70
70
F
143 155Right-handed alpha
Helix 71
71
F
155 170Right-handed alpha
Helix 72
72
F
172 191Right-handed alpha
Helix 73
73
G
3 7Right-handed 310
Helix 74
74
G
9 23Right-handed alpha
Helix 75
75
G
30 38Right-handed alpha
Helix 76
76
G
49 62Right-handed alpha
Helix 77
77
G
67 77Right-handed alpha
Helix 78
78
G
87 93Right-handed alpha
Helix 79
79
G
100 113Right-handed alpha
Helix 80
80
G
127 141Right-handed alpha
Helix 81
81
G
143 155Right-handed alpha
Helix 82
82
G
155 170Right-handed alpha
Helix 83
83
G
172 192Right-handed alpha
Helix 84
84
H
3 7Right-handed 310
Helix 85
85
H
9 23Right-handed alpha
Helix 86
86
H
30 38Right-handed alpha
Helix 87
87
H
41 46Right-handed alpha
Helix 88
88
H
49 52Right-handed 310
Helix 89
89
H
53 62Right-handed alpha
Helix 90
90
H
67 77Right-handed alpha
Helix 91
91
H
88 93Right-handed alpha
Helix 92
92
H
100 114Right-handed alpha
Helix 93
93
H
127 141Right-handed alpha
Helix 94
94
H
143 155Right-handed alpha
Helix 95
95
H
155 169Right-handed alpha
Helix 96
96
H
172 178Right-handed alpha
Helix 97
97
H
179 192Right-handed alpha
Back to top of page
There are no sheets in PDB entry 3U41
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il