Analysis of interatomic Contacts of Structural Units in PDB entry:
3U6W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3U6W entry

There are 2 chains in PDB entry 3U6W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 19VAL 425
B
 THR 18VAL 425
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 3U6W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
42 46Right-handed 310
Helix 2
2
A
48 53Right-handed alpha
Helix 3
3
A
62 66Right-handed 310
Helix 4
4
A
80 86Right-handed alpha
Helix 5
5
A
91 106Right-handed alpha
Helix 6
6
A
114 117Right-handed 310
Helix 7
7
A
118 131Right-handed alpha
Helix 8
8
A
147 158Right-handed alpha
Helix 9
9
A
173 180Right-handed alpha
Helix 10
10
A
184 206Right-handed alpha
Helix 11
11
A
219 223Right-handed 310
Helix 12
12
A
224 240Right-handed alpha
Helix 13
13
A
259 274Right-handed alpha
Helix 14
14
A
276 278Right-handed 310
Helix 15
15
A
292 303Right-handed alpha
Helix 16
16
A
311 315Right-handed 310
Helix 17
17
A
323 333Right-handed alpha
Helix 18
18
A
344 357Right-handed alpha
Helix 19
19
A
376 391Right-handed alpha
Helix 20
20
A
400 404Right-handed 310
Helix 21
21
A
414 419Right-handed 310
Helix 22
22
B
42 46Right-handed 310
Helix 23
23
B
48 53Right-handed alpha
Helix 24
24
B
62 66Right-handed 310
Helix 25
25
B
80 86Right-handed alpha
Helix 26
26
B
91 106Right-handed alpha
Helix 27
27
B
118 131Right-handed alpha
Helix 28
28
B
147 158Right-handed alpha
Helix 29
29
B
173 180Right-handed alpha
Helix 30
30
B
184 206Right-handed alpha
Helix 31
31
B
219 223Right-handed 310
Helix 32
32
B
224 240Right-handed alpha
Helix 33
33
B
259 274Right-handed alpha
Helix 34
34
B
276 278Right-handed 310
Helix 35
35
B
292 303Right-handed alpha
Helix 36
36
B
311 315Right-handed 310
Helix 37
37
B
323 333Right-handed alpha
Helix 38
38
B
344 357Right-handed alpha
Helix 39
39
B
376 395Right-handed alpha
Helix 40
40
B
400 404Right-handed 310
Helix 41
41
B
414 419Right-handed 310
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There are 4 sheets in PDB entry 3U6W. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 76first strand
Strand 2
A
109 113parallel
Strand 3
A
139 145parallel
Strand 4
A
163 171parallel
Strand 5
A
210 218parallel
Strand 6
A
247 253parallel
Strand 7
A
280 286parallel
Strand 8
A
307 310parallel
Strand 9
A
73 76parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 374first strand
Strand 2
A
423 424parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
73 76first strand
Strand 2
B
109 113parallel
Strand 3
B
139 145parallel
Strand 4
B
163 171parallel
Strand 5
B
210 218parallel
Strand 6
B
247 253parallel
Strand 7
B
280 286parallel
Strand 8
B
307 310parallel
Strand 9
B
73 76parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
373 374first strand
Strand 2
B
423 424parallel
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