Analysis of interatomic Contacts of Structural Units in PDB entry:
3U7H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3U7H entry

There are 3 chains in PDB entry 3U7H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 142PHE 449
B
 ALA 451GLY 522
X
 T 526 T 527
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3U7H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
197 208Right-handed alpha
Helix 2
2
B
218 223Right-handed alpha
Helix 3
3
B
227 243Right-handed alpha
Helix 4
4
B
262 272Right-handed alpha
Helix 5
5
B
307 317Right-handed alpha
Helix 6
6
B
322 329Right-handed alpha
Helix 7
7
B
341 345Right-handed 310
Helix 8
8
B
376 385Right-handed alpha
Helix 9
9
B
386 389Right-handed 310
Helix 10
10
B
394 398Right-handed 310
Helix 11
11
B
405 414Right-handed alpha
Helix 12
12
B
426 441Right-handed alpha
Helix 13
13
B
452 467Right-handed alpha
Helix 14
14
B
474 485Right-handed alpha
Helix 15
15
B
489 493Right-handed 310
Helix 16
16
B
509 517Right-handed alpha
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There are 3 sheets in PDB entry 3U7H. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 149first strand
Strand 2
B
152 156anti-parallel
Strand 3
B
247 251anti-parallel
Strand 4
B
211 217parallel
Strand 5
B
166 169parallel
Strand 6
B
284 286parallel
Strand 7
B
320 321parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
176 177first strand
Strand 2
B
192 193anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
391 393first strand
Strand 2
B
418 420parallel
Strand 3
B
366 370parallel
Strand 4
B
444 449parallel
Strand 5
B
496 500parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il