Analysis of interatomic Contacts of Structural Units in PDB entry:
3U7V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3U7V entry

There is 1 chain in PDB entry 3U7V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 33TYR 549
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 3U7V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
68 70Right-handed 310
Helix 2
2
A
71 83Right-handed alpha
Helix 3
3
A
93 97Right-handed alpha
Helix 4
4
A
105 118Right-handed alpha
Helix 5
5
A
139 144Right-handed alpha
Helix 6
6
A
167 190Right-handed alpha
Helix 7
7
A
214 223Right-handed alpha
Helix 8
8
A
226 234Right-handed alpha
Helix 9
9
A
239 245Right-handed alpha
Helix 10
10
A
247 270Right-handed alpha
Helix 11
11
A
290 294Right-handed 310
Helix 12
12
A
300 302Right-handed 310
Helix 13
13
A
303 311Right-handed alpha
Helix 14
14
A
325 337Right-handed alpha
Helix 15
15
A
351 355Right-handed 310
Helix 16
16
A
356 364Right-handed alpha
Helix 17
17
A
390 405Right-handed alpha
Helix 18
18
A
407 417Right-handed alpha
Helix 19
19
A
525 529Right-handed 310
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There are 5 sheets in PDB entry 3U7V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 42first strand
Strand 2
A
45 50anti-parallel
Strand 3
A
53 55anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 61first strand
Strand 2
A
86 92parallel
Strand 3
A
121 131parallel
Strand 4
A
195 202parallel
Strand 5
A
276 281parallel
Strand 6
A
316 321parallel
Strand 7
A
344 348parallel
Strand 8
A
368 371parallel
Strand 9
A
57 61parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 153first strand
Strand 2
A
159 163anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
420 424first strand
Strand 2
A
471 478anti-parallel
Strand 3
A
481 487anti-parallel
Strand 4
A
541 548anti-parallel
Strand 5
A
503 514anti-parallel
Strand 6
A
517 523anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
432 436first strand
Strand 2
A
439 444anti-parallel
Strand 3
A
489 495anti-parallel
Strand 4
A
533 535anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il