Analysis of interatomic Contacts of Structural Units in PDB entry:
3U92


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3U92 entry

There are 2 chains in PDB entry 3U92 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3PRO 256
B
 ASN 3PRO 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 3U92. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
27 30Right-handed 310
Helix 2
2
A
34 48Right-handed alpha
Helix 3
3
A
71 79Right-handed alpha
Helix 4
4
A
92 97Right-handed alpha
Helix 5
5
A
122 128Right-handed alpha
Helix 6
6
A
140 149Right-handed alpha
Helix 7
7
A
151 164Right-handed alpha
Helix 8
8
A
171 182Right-handed alpha
Helix 9
9
A
190 198Right-handed alpha
Helix 10
10
A
224 239Right-handed alpha
Helix 11
11
A
240 251Right-handed alpha
Helix 12
12
B
27 30Right-handed 310
Helix 13
13
B
34 48Right-handed alpha
Helix 14
14
B
71 79Right-handed alpha
Helix 15
15
B
92 97Right-handed alpha
Helix 16
16
B
122 128Right-handed alpha
Helix 17
17
B
140 149Right-handed alpha
Helix 18
18
B
151 164Right-handed alpha
Helix 19
19
B
165 168Right-handed 310
Helix 20
20
B
171 182Right-handed alpha
Helix 21
21
B
190 198Right-handed alpha
Helix 22
22
B
225 239Right-handed alpha
Helix 23
23
B
240 251Right-handed alpha
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There are 10 sheets in PDB entry 3U92. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 55first strand
Strand 2
A
6 10parallel
Strand 3
A
84 85parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 19first strand
Strand 2
A
32 33anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 101first strand
Strand 2
A
218 220anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 108first strand
Strand 2
A
213 215anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 135first strand
Strand 2
A
184 189parallel
Strand 3
A
110 115anti-parallel
Strand 4
A
203 206anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 55first strand
Strand 2
B
6 10parallel
Strand 3
B
84 85parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 19first strand
Strand 2
B
32 33anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 101first strand
Strand 2
B
218 220anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 108first strand
Strand 2
B
213 215anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 135first strand
Strand 2
B
184 189parallel
Strand 3
B
110 115anti-parallel
Strand 4
B
203 206anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il