Analysis of interatomic Contacts of Structural Units in PDB entry:
3UAK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UAK entry

There are 2 chains in PDB entry 3UAK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1LEU 396
B
 MSE 1LEU 396
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 3UAK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 22Right-handed alpha
Helix 2
2
A
46 58Right-handed alpha
Helix 3
3
A
73 84Right-handed alpha
Helix 4
4
A
87 92Right-handed alpha
Helix 5
5
A
103 118Right-handed alpha
Helix 6
6
A
131 139Right-handed alpha
Helix 7
7
A
158 166Right-handed alpha
Helix 8
8
A
190 205Right-handed alpha
Helix 9
9
A
220 225Right-handed alpha
Helix 10
10
A
225 233Right-handed alpha
Helix 11
11
A
264 281Right-handed alpha
Helix 12
12
A
288 300Right-handed alpha
Helix 13
13
A
300 332Right-handed alpha
Helix 14
14
A
340 344Right-handed 310
Helix 15
15
A
354 366Right-handed alpha
Helix 16
16
A
378 380Right-handed 310
Helix 17
17
A
384 396Right-handed alpha
Helix 18
18
B
14 22Right-handed alpha
Helix 19
19
B
46 58Right-handed alpha
Helix 20
20
B
73 84Right-handed alpha
Helix 21
21
B
87 92Right-handed alpha
Helix 22
22
B
103 118Right-handed alpha
Helix 23
23
B
131 139Right-handed alpha
Helix 24
24
B
158 166Right-handed alpha
Helix 25
25
B
167 169Right-handed 310
Helix 26
26
B
190 205Right-handed alpha
Helix 27
27
B
220 225Right-handed alpha
Helix 28
28
B
225 233Right-handed alpha
Helix 29
29
B
264 281Right-handed alpha
Helix 30
30
B
288 300Right-handed alpha
Helix 31
31
B
300 332Right-handed alpha
Helix 32
32
B
340 344Right-handed 310
Helix 33
33
B
354 366Right-handed alpha
Helix 34
34
B
378 380Right-handed 310
Helix 35
35
B
384 395Right-handed alpha
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There are 6 sheets in PDB entry 3UAK. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 30first strand
Strand 2
A
367 368parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 100first strand
Strand 2
A
256 261anti-parallel
Strand 3
A
238 243anti-parallel
Strand 4
A
207 212parallel
Strand 5
A
174 178parallel
Strand 6
A
122 127parallel
Strand 7
A
143 148parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 350first strand
Strand 2
A
374 376anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 30first strand
Strand 2
B
367 368parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 100first strand
Strand 2
B
256 261anti-parallel
Strand 3
B
238 243anti-parallel
Strand 4
B
207 212parallel
Strand 5
B
174 178parallel
Strand 6
B
122 127parallel
Strand 7
B
143 148parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
348 350first strand
Strand 2
B
374 376anti-parallel
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