Analysis of interatomic Contacts of Structural Units in PDB entry:
3UAM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UAM entry

There are 6 chains in PDB entry 3UAM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 17ALA 214
B
 PRO 17ALA 214
C
 VAL 22ALA 214
D
 ILE 15ALA 214
E
 VAL 22ALA 214
F
 SER 16ALA 214
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 3UAM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
27 35Right-handed alpha
Helix 2
2
A
39 44Right-handed alpha
Helix 3
3
A
87 94Right-handed 310
Helix 4
4
A
95 100Right-handed alpha
Helix 5
5
A
143 147Right-handed 310
Helix 6
6
A
166 172Right-handed alpha
Helix 7
7
B
27 35Right-handed alpha
Helix 8
8
B
39 45Right-handed alpha
Helix 9
9
B
87 94Right-handed 310
Helix 10
10
B
95 100Right-handed alpha
Helix 11
11
B
143 147Right-handed 310
Helix 12
12
B
166 172Right-handed alpha
Helix 13
13
C
27 35Right-handed alpha
Helix 14
14
C
39 44Right-handed alpha
Helix 15
15
C
87 94Right-handed 310
Helix 16
16
C
95 100Right-handed alpha
Helix 17
17
C
143 147Right-handed 310
Helix 18
18
C
166 172Right-handed alpha
Helix 19
19
D
27 35Right-handed alpha
Helix 20
20
D
39 43Right-handed 310
Helix 21
21
D
87 94Right-handed 310
Helix 22
22
D
95 100Right-handed alpha
Helix 23
23
D
143 147Right-handed 310
Helix 24
24
D
166 172Right-handed alpha
Helix 25
25
E
27 35Right-handed alpha
Helix 26
26
E
39 44Right-handed alpha
Helix 27
27
E
87 94Right-handed 310
Helix 28
28
E
95 100Right-handed alpha
Helix 29
29
E
143 147Right-handed 310
Helix 30
30
E
166 172Right-handed alpha
Helix 31
31
F
27 35Right-handed alpha
Helix 32
32
F
39 43Right-handed 310
Helix 33
33
F
87 94Right-handed 310
Helix 34
34
F
95 100Right-handed alpha
Helix 35
35
F
143 147Right-handed 310
Helix 36
36
F
166 172Right-handed alpha
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There are 18 sheets in PDB entry 3UAM. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 24first strand
Strand 2
A
111 119anti-parallel
Strand 3
A
177 182anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 49first strand
Strand 2
A
203 213anti-parallel
Strand 3
A
104 106parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 49first strand
Strand 2
A
203 213anti-parallel
Strand 3
A
188 198anti-parallel
Strand 4
A
124 131anti-parallel
Strand 5
A
153 156anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 24first strand
Strand 2
B
111 119anti-parallel
Strand 3
B
177 182anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 49first strand
Strand 2
B
203 213anti-parallel
Strand 3
B
104 106parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 49first strand
Strand 2
B
203 213anti-parallel
Strand 3
B
188 198anti-parallel
Strand 4
B
124 131anti-parallel
Strand 5
B
153 156anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
23 24first strand
Strand 2
C
111 116anti-parallel
Strand 3
C
177 182anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 49first strand
Strand 2
C
203 213anti-parallel
Strand 3
C
104 106parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 49first strand
Strand 2
C
203 213anti-parallel
Strand 3
C
188 198anti-parallel
Strand 4
C
124 131anti-parallel
Strand 5
C
153 156anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
23 24first strand
Strand 2
D
111 116anti-parallel
Strand 3
D
177 182anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
47 49first strand
Strand 2
D
203 213anti-parallel
Strand 3
D
104 106parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
47 49first strand
Strand 2
D
203 213anti-parallel
Strand 3
D
188 198anti-parallel
Strand 4
D
124 131anti-parallel
Strand 5
D
153 156anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
23 24first strand
Strand 2
E
111 116anti-parallel
Strand 3
E
177 182anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
47 49first strand
Strand 2
E
203 213anti-parallel
Strand 3
E
104 106parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
47 49first strand
Strand 2
E
203 213anti-parallel
Strand 3
E
188 198anti-parallel
Strand 4
E
124 131anti-parallel
Strand 5
E
153 156anti-parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
23 24first strand
Strand 2
F
111 116anti-parallel
Strand 3
F
177 182anti-parallel
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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
47 49first strand
Strand 2
F
203 213anti-parallel
Strand 3
F
104 106parallel
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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
47 49first strand
Strand 2
F
203 213anti-parallel
Strand 3
F
188 198anti-parallel
Strand 4
F
124 131anti-parallel
Strand 5
F
153 156anti-parallel
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