Analysis of interatomic Contacts of Structural Units in PDB entry:
3UAU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UAU entry

There are 2 chains in PDB entry 3UAU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 17MET 367
B
 MET 17LEU 366
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 3UAU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 47Right-handed alpha
Helix 2
2
A
112 123Right-handed alpha
Helix 3
3
A
138 149Right-handed alpha
Helix 4
4
A
153 166Right-handed alpha
Helix 5
5
A
208 217Right-handed alpha
Helix 6
6
A
232 238Right-handed alpha
Helix 7
7
A
248 253Right-handed alpha
Helix 8
8
A
273 291Right-handed alpha
Helix 9
9
A
293 311Right-handed alpha
Helix 10
10
A
331 336Right-handed alpha
Helix 11
11
A
350 366Right-handed alpha
Helix 12
12
B
23 50Right-handed alpha
Helix 13
13
B
112 123Right-handed alpha
Helix 14
14
B
138 149Right-handed alpha
Helix 15
15
B
153 166Right-handed alpha
Helix 16
16
B
208 217Right-handed alpha
Helix 17
17
B
233 237Right-handed 310
Helix 18
18
B
248 253Right-handed alpha
Helix 19
19
B
273 289Right-handed alpha
Helix 20
20
B
293 311Right-handed alpha
Helix 21
21
B
328 330Right-handed 310
Helix 22
22
B
331 336Right-handed alpha
Helix 23
23
B
350 366Right-handed alpha
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There are 6 sheets in PDB entry 3UAU. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 54first strand
Strand 2
A
66 79anti-parallel
Strand 3
A
59 63anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 54first strand
Strand 2
A
66 79anti-parallel
Strand 3
A
85 98anti-parallel
Strand 4
A
125 137anti-parallel
Strand 5
A
168 179anti-parallel
Strand 6
A
182 192anti-parallel
Strand 7
A
196 207anti-parallel
Strand 8
A
256 268anti-parallel
Strand 9
A
315 324anti-parallel
Strand 10
A
340 342anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 111first strand
Strand 2
A
220 221anti-parallel
Strand 3
A
228 229anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 54first strand
Strand 2
B
66 79anti-parallel
Strand 3
B
59 63anti-parallel
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There are 10 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 54first strand
Strand 2
B
66 79anti-parallel
Strand 3
B
85 98anti-parallel
Strand 4
B
125 137anti-parallel
Strand 5
B
168 179anti-parallel
Strand 6
B
182 192anti-parallel
Strand 7
B
196 207anti-parallel
Strand 8
B
256 268anti-parallel
Strand 9
B
315 324anti-parallel
Strand 10
B
340 345anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 111first strand
Strand 2
B
220 221anti-parallel
Strand 3
B
228 229anti-parallel
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