Analysis of interatomic Contacts of Structural Units in PDB entry:
3UC1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UC1 entry

There is 1 chain in PDB entry 3UC1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 512ALA 819
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 3UC1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
531 538Right-handed alpha
Helix 2
2
A
550 553Right-handed 310
Helix 3
3
A
582 584Right-handed 310
Helix 4
4
A
596 600Right-handed alpha
Helix 5
5
A
638 641Right-handed 310
Helix 6
6
A
738 740Right-handed 310
Helix 7
7
A
789 791Right-handed 310
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There are 6 sheets in PDB entry 3UC1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
555 562first strand
Strand 2
A
515 521anti-parallel
Strand 3
A
525 530anti-parallel
Strand 4
A
594 595anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
608 614first strand
Strand 2
A
566 571anti-parallel
Strand 3
A
575 580anti-parallel
Strand 4
A
648 649anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
659 665first strand
Strand 2
A
622 627anti-parallel
Strand 3
A
631 636anti-parallel
Strand 4
A
700 701anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
711 716first strand
Strand 2
A
670 675anti-parallel
Strand 3
A
679 684anti-parallel
Strand 4
A
750 751anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
762 768first strand
Strand 2
A
722 727anti-parallel
Strand 3
A
731 736anti-parallel
Strand 4
A
801 802anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
783 787first strand
Strand 2
A
773 778anti-parallel
Strand 3
A
812 817anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il