Analysis of interatomic Contacts of Structural Units in PDB entry:
3UE1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UE1 entry

There are 2 chains in PDB entry 3UE1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 27LYS 736
B
 LYS 27VAL 732
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 3UE1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
51 55Right-handed 310
Helix 2
2
A
56 65Right-handed alpha
Helix 3
3
A
134 142Right-handed alpha
Helix 4
4
A
156 166Right-handed alpha
Helix 5
5
A
168 172Right-handed 310
Helix 6
6
A
173 183Right-handed alpha
Helix 7
7
A
195 213Right-handed alpha
Helix 8
8
A
217 227Right-handed alpha
Helix 9
9
A
242 258Right-handed alpha
Helix 10
10
A
259 262Right-handed 310
Helix 11
11
A
273 296Right-handed alpha
Helix 12
12
A
306 310Right-handed 310
Helix 13
13
A
342 346Right-handed 310
Helix 14
14
A
364 368Right-handed 310
Helix 15
15
A
423 428Right-handed alpha
Helix 16
16
A
432 435Right-handed 310
Helix 17
17
A
436 447Right-handed alpha
Helix 18
18
A
480 486Right-handed alpha
Helix 19
19
A
488 500Right-handed alpha
Helix 20
20
A
500 511Right-handed alpha
Helix 21
21
A
514 518Right-handed 310
Helix 22
22
A
521 527Right-handed 310
Helix 23
23
A
532 545Right-handed alpha
Helix 24
24
A
575 579Right-handed 310
Helix 25
25
A
635 652Right-handed alpha
Helix 26
26
A
653 656Right-handed 310
Helix 27
27
A
657 662Right-handed alpha
Helix 28
28
A
674 676Right-handed 310
Helix 29
29
A
707 712Right-handed alpha
Helix 30
30
A
712 725Right-handed alpha
Helix 31
31
B
51 55Right-handed 310
Helix 32
32
B
56 65Right-handed alpha
Helix 33
33
B
135 142Right-handed alpha
Helix 34
34
B
156 166Right-handed alpha
Helix 35
35
B
168 172Right-handed 310
Helix 36
36
B
173 183Right-handed alpha
Helix 37
37
B
195 213Right-handed alpha
Helix 38
38
B
217 227Right-handed alpha
Helix 39
39
B
242 258Right-handed alpha
Helix 40
40
B
259 262Right-handed 310
Helix 41
41
B
273 296Right-handed alpha
Helix 42
42
B
306 310Right-handed 310
Helix 43
43
B
342 346Right-handed 310
Helix 44
44
B
364 368Right-handed 310
Helix 45
45
B
423 428Right-handed alpha
Helix 46
46
B
432 435Right-handed 310
Helix 47
47
B
436 447Right-handed alpha
Helix 48
48
B
480 486Right-handed alpha
Helix 49
49
B
488 500Right-handed alpha
Helix 50
50
B
500 511Right-handed alpha
Helix 51
51
B
514 518Right-handed 310
Helix 52
52
B
521 527Right-handed 310
Helix 53
53
B
532 545Right-handed alpha
Helix 54
54
B
576 580Right-handed 310
Helix 55
55
B
635 651Right-handed alpha
Helix 56
56
B
657 661Right-handed 310
Helix 57
57
B
674 677Right-handed 310
Helix 58
58
B
707 712Right-handed alpha
Helix 59
59
B
712 725Right-handed alpha
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There are 15 sheets in PDB entry 3UE1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 238first strand
Strand 2
A
38 42anti-parallel
Strand 3
A
29 32anti-parallel
Strand 4
A
267 270parallel
Strand 5
A
555 559anti-parallel
Strand 6
A
565 568anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
154 155parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 303first strand
Strand 2
A
373 379anti-parallel
Strand 3
A
317 324anti-parallel
Strand 4
A
329 332anti-parallel
Strand 5
A
338 341anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 303first strand
Strand 2
A
373 379anti-parallel
Strand 3
A
386 389anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 354first strand
Strand 2
A
357 358anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
408 412first strand
Strand 2
A
395 401anti-parallel
Strand 3
A
689 695anti-parallel
Strand 4
A
678 684anti-parallel
Strand 5
A
667 672anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
454 457first strand
Strand 2
A
476 479anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
572 573first strand
Strand 2
A
628 629parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
237 238first strand
Strand 2
B
38 42anti-parallel
Strand 3
B
29 32anti-parallel
Strand 4
B
267 270parallel
Strand 5
B
555 559anti-parallel
Strand 6
B
565 568anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 47first strand
Strand 2
B
154 155parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
302 303first strand
Strand 2
B
373 379anti-parallel
Strand 3
B
317 324anti-parallel
Strand 4
B
329 332anti-parallel
Strand 5
B
338 341anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
302 303first strand
Strand 2
B
373 379anti-parallel
Strand 3
B
386 389anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
352 354first strand
Strand 2
B
357 358anti-parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
408 412first strand
Strand 2
B
395 401anti-parallel
Strand 3
B
689 695anti-parallel
Strand 4
B
679 684anti-parallel
Strand 5
B
667 672anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
454 457first strand
Strand 2
B
476 479anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il