Analysis of interatomic Contacts of Structural Units in PDB entry:
3UEK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UEK entry

There is 1 chain in PDB entry 3UEK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 438SER 958
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 3UEK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
453 457Right-handed 310
Helix 2
2
A
481 485Right-handed 310
Helix 3
3
A
531 540Right-handed alpha
Helix 4
4
A
545 556Right-handed alpha
Helix 5
5
A
557 561Right-handed 310
Helix 6
6
A
566 575Right-handed alpha
Helix 7
7
A
578 588Right-handed alpha
Helix 8
8
A
588 599Right-handed alpha
Helix 9
9
A
599 604Right-handed alpha
Helix 10
10
A
623 635Right-handed alpha
Helix 11
11
A
657 662Right-handed 310
Helix 12
12
A
667 685Right-handed alpha
Helix 13
13
A
703 707Right-handed 310
Helix 14
14
A
721 726Right-handed alpha
Helix 15
15
A
749 758Right-handed alpha
Helix 16
16
A
759 762Right-handed 310
Helix 17
17
A
763 768Right-handed alpha
Helix 18
18
A
791 795Right-handed 310
Helix 19
19
A
827 832Right-handed 310
Helix 20
20
A
833 849Right-handed alpha
Helix 21
21
A
854 858Right-handed 310
Helix 22
22
A
874 889Right-handed alpha
Helix 23
23
A
900 917Right-handed alpha
Helix 24
24
A
920 936Right-handed alpha
Helix 25
25
A
947 958Right-handed alpha
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There are 3 sheets in PDB entry 3UEK. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
449 451first strand
Strand 2
A
714 717anti-parallel
Strand 3
A
893 896parallel
Strand 4
A
861 864parallel
Strand 5
A
730 735parallel
Strand 6
A
816 821parallel
Strand 7
A
775 780anti-parallel
Strand 8
A
690 697anti-parallel
Strand 9
A
617 622anti-parallel
Strand 10
A
476 478parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
516 520first strand
Strand 2
A
526 530anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
786 789first strand
Strand 2
A
796 800anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il