Analysis of interatomic Contacts of Structural Units in PDB entry:
3UEL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3UEL entry

There are 3 chains in PDB entry 3UEL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 438	SER 958
B	TYR 438	SER 958
C	TYR 438	THR 694

There are 69 helices in PDB entry 3UEL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	453	457	Right-handed 310
Helix 2	2	A	531	540	Right-handed alpha
Helix 3	3	A	545	557	Right-handed alpha
Helix 4	4	A	558	561	Right-handed 310
Helix 5	5	A	566	575	Right-handed alpha
Helix 6	6	A	578	588	Right-handed alpha
Helix 7	7	A	588	599	Right-handed alpha
Helix 8	8	A	600	603	Right-handed 310
Helix 9	9	A	623	635	Right-handed alpha
Helix 10	10	A	648	652	Right-handed 310
Helix 11	11	A	656	662	Right-handed 310
Helix 12	12	A	666	685	Right-handed alpha
Helix 13	13	A	721	726	Right-handed alpha
Helix 14	14	A	749	758	Right-handed alpha
Helix 15	15	A	759	762	Right-handed 310
Helix 16	16	A	763	768	Right-handed alpha
Helix 17	17	A	791	795	Right-handed 310
Helix 18	18	A	827	832	Right-handed 310
Helix 19	19	A	833	849	Right-handed alpha
Helix 20	20	A	874	890	Right-handed alpha
Helix 21	21	A	900	917	Right-handed alpha
Helix 22	22	A	920	936	Right-handed alpha
Helix 23	23	A	947	958	Right-handed alpha
Helix 24	24	B	453	457	Right-handed 310
Helix 25	25	B	531	540	Right-handed alpha
Helix 26	26	B	545	557	Right-handed alpha
Helix 27	27	B	558	561	Right-handed 310
Helix 28	28	B	566	575	Right-handed alpha
Helix 29	29	B	578	588	Right-handed alpha
Helix 30	30	B	588	599	Right-handed alpha
Helix 31	31	B	600	603	Right-handed 310
Helix 32	32	B	623	635	Right-handed alpha
Helix 33	33	B	648	652	Right-handed 310
Helix 34	34	B	656	662	Right-handed 310
Helix 35	35	B	666	685	Right-handed alpha
Helix 36	36	B	721	726	Right-handed alpha
Helix 37	37	B	749	758	Right-handed alpha
Helix 38	38	B	759	762	Right-handed 310
Helix 39	39	B	763	768	Right-handed alpha
Helix 40	40	B	791	795	Right-handed 310
Helix 41	41	B	829	832	Right-handed 310
Helix 42	42	B	833	849	Right-handed alpha
Helix 43	43	B	874	890	Right-handed alpha
Helix 44	44	B	900	918	Right-handed alpha
Helix 45	45	B	920	936	Right-handed alpha
Helix 46	46	B	947	957	Right-handed alpha
Helix 47	47	C	453	457	Right-handed 310
Helix 48	48	C	531	540	Right-handed alpha
Helix 49	49	C	545	557	Right-handed alpha
Helix 50	50	C	558	561	Right-handed 310
Helix 51	51	C	566	575	Right-handed alpha
Helix 52	52	C	578	588	Right-handed alpha
Helix 53	53	C	588	599	Right-handed alpha
Helix 54	54	C	600	603	Right-handed 310
Helix 55	55	C	623	635	Right-handed alpha
Helix 56	56	C	647	652	Right-handed 310
Helix 57	57	C	657	662	Right-handed 310
Helix 58	58	C	666	685	Right-handed alpha
Helix 59	59	C	721	726	Right-handed alpha
Helix 60	60	C	749	758	Right-handed alpha
Helix 61	61	C	759	762	Right-handed 310
Helix 62	62	C	763	768	Right-handed alpha
Helix 63	63	C	791	795	Right-handed 310
Helix 64	64	C	829	832	Right-handed 310
Helix 65	65	C	833	849	Right-handed alpha
Helix 66	66	C	874	890	Right-handed alpha
Helix 67	67	C	900	918	Right-handed alpha
Helix 68	68	C	922	934	Right-handed alpha
Helix 69	69	C	947	956	Right-handed alpha

There are 9 sheets in PDB entry 3UEL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	449	451	first strand
Strand 2	A	714	717	anti-parallel
Strand 3	A	893	896	parallel
Strand 4	A	861	864	parallel
Strand 5	A	730	735	parallel
Strand 6	A	816	821	parallel
Strand 7	A	775	780	anti-parallel
Strand 8	A	690	697	anti-parallel
Strand 9	A	618	622	anti-parallel
Strand 10	A	476	478	parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	516	520	first strand
Strand 2	A	526	530	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	786	789	first strand
Strand 2	A	796	800	anti-parallel

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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	449	451	first strand
Strand 2	B	714	717	anti-parallel
Strand 3	B	893	896	parallel
Strand 4	B	861	864	parallel
Strand 5	B	730	735	parallel
Strand 6	B	816	821	parallel
Strand 7	B	775	780	anti-parallel
Strand 8	B	690	697	anti-parallel
Strand 9	B	618	622	anti-parallel
Strand 10	B	476	478	parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	516	520	first strand
Strand 2	B	526	530	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	786	789	first strand
Strand 2	B	796	800	anti-parallel

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There are 10 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	449	451	first strand
Strand 2	C	714	717	anti-parallel
Strand 3	C	893	896	parallel
Strand 4	C	861	864	parallel
Strand 5	C	730	735	parallel
Strand 6	C	816	821	parallel
Strand 7	C	775	780	anti-parallel
Strand 8	C	690	697	anti-parallel
Strand 9	C	618	622	anti-parallel
Strand 10	C	476	478	parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	516	520	first strand
Strand 2	C	526	530	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	786	789	first strand
Strand 2	C	796	800	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3UEL

Analysis of interatomic Contacts of Structural Units in PDB entry:
3UEL