Analysis of interatomic Contacts of Structural Units in PDB entry:
3UF0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UF0 entry

There are 2 chains in PDB entry 3UF0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 3SER 251
B
 GLY 3SER 251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 3UF0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 32Right-handed alpha
Helix 2
2
A
43 54Right-handed alpha
Helix 3
3
A
68 83Right-handed alpha
Helix 4
4
A
99 103Right-handed 310
Helix 5
5
A
104 116Right-handed alpha
Helix 6
6
A
116 134Right-handed alpha
Helix 7
7
A
143 147Right-handed 310
Helix 8
8
A
153 175Right-handed alpha
Helix 9
9
A
191 193Right-handed 310
Helix 10
10
A
194 199Right-handed alpha
Helix 11
11
A
200 211Right-handed alpha
Helix 12
12
A
218 221Right-handed 310
Helix 13
13
A
222 231Right-handed alpha
Helix 14
14
A
232 235Right-handed 310
Helix 15
15
A
247 251Right-handed 310
Helix 16
16
B
19 32Right-handed alpha
Helix 17
17
B
43 55Right-handed alpha
Helix 18
18
B
68 83Right-handed alpha
Helix 19
19
B
99 103Right-handed 310
Helix 20
20
B
104 116Right-handed alpha
Helix 21
21
B
116 134Right-handed alpha
Helix 22
22
B
143 147Right-handed 310
Helix 23
23
B
153 175Right-handed alpha
Helix 24
24
B
191 193Right-handed 310
Helix 25
25
B
194 200Right-handed alpha
Helix 26
26
B
200 211Right-handed alpha
Helix 27
27
B
218 221Right-handed 310
Helix 28
28
B
222 231Right-handed alpha
Helix 29
29
B
232 235Right-handed 310
Helix 30
30
B
247 251Right-handed 310
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There are 2 sheets in PDB entry 3UF0. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 63first strand
Strand 2
A
35 40parallel
Strand 3
A
11 15parallel
Strand 4
A
87 90parallel
Strand 5
A
136 141parallel
Strand 6
A
179 186parallel
Strand 7
A
241 244parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 63first strand
Strand 2
B
35 40parallel
Strand 3
B
11 15parallel
Strand 4
B
87 90parallel
Strand 5
B
136 141parallel
Strand 6
B
179 186parallel
Strand 7
B
241 244parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il