Analysis of interatomic Contacts of Structural Units in PDB entry:
3UF2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UF2 entry

There are 10 chains in PDB entry 3UF2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3SER 147
B
 TYR 6CYS 146
C
 GLU 5SER 147
D
 TYR 6CYS 146
E
 VAL 3SER 148
F
 SER 4CYS 146
G
 SER 4SER 147
H
 GLU 5CYS 146
I
 VAL 3SER 147
J
 VAL 3SER 147
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 3UF2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 8Right-handed 310
Helix 2
2
A
12 25Right-handed alpha
Helix 3
3
A
45 64Right-handed alpha
Helix 4
4
A
71 88Right-handed alpha
Helix 5
5
A
109 131Right-handed alpha
Helix 6
6
A
133 137Right-handed 310
Helix 7
7
A
139 145Right-handed alpha
Helix 8
8
B
12 26Right-handed alpha
Helix 9
9
B
45 64Right-handed alpha
Helix 10
10
B
71 88Right-handed alpha
Helix 11
11
B
89 91Right-handed 310
Helix 12
12
B
109 131Right-handed alpha
Helix 13
13
B
133 137Right-handed 310
Helix 14
14
B
139 145Right-handed alpha
Helix 15
15
C
12 25Right-handed alpha
Helix 16
16
C
45 64Right-handed alpha
Helix 17
17
C
71 88Right-handed alpha
Helix 18
18
C
89 91Right-handed 310
Helix 19
19
C
109 131Right-handed alpha
Helix 20
20
C
133 137Right-handed 310
Helix 21
21
C
139 145Right-handed alpha
Helix 22
22
D
12 25Right-handed alpha
Helix 23
23
D
45 64Right-handed alpha
Helix 24
24
D
71 88Right-handed alpha
Helix 25
25
D
109 131Right-handed alpha
Helix 26
26
D
133 137Right-handed 310
Helix 27
27
D
139 145Right-handed alpha
Helix 28
28
E
5 10Right-handed 310
Helix 29
29
E
12 25Right-handed alpha
Helix 30
30
E
45 64Right-handed alpha
Helix 31
31
E
71 88Right-handed alpha
Helix 32
32
E
109 129Right-handed alpha
Helix 33
33
E
133 137Right-handed 310
Helix 34
34
E
139 146Right-handed alpha
Helix 35
35
F
5 10Right-handed 310
Helix 36
36
F
12 25Right-handed alpha
Helix 37
37
F
45 64Right-handed alpha
Helix 38
38
F
71 88Right-handed alpha
Helix 39
39
F
89 91Right-handed 310
Helix 40
40
F
109 131Right-handed alpha
Helix 41
41
F
133 137Right-handed 310
Helix 42
42
F
139 145Right-handed alpha
Helix 43
43
G
6 10Right-handed 310
Helix 44
44
G
12 25Right-handed alpha
Helix 45
45
G
45 64Right-handed alpha
Helix 46
46
G
71 88Right-handed alpha
Helix 47
47
G
89 91Right-handed 310
Helix 48
48
G
109 131Right-handed alpha
Helix 49
49
G
133 137Right-handed 310
Helix 50
50
G
139 145Right-handed alpha
Helix 51
51
H
5 10Right-handed 310
Helix 52
52
H
12 26Right-handed alpha
Helix 53
53
H
45 64Right-handed alpha
Helix 54
54
H
71 88Right-handed alpha
Helix 55
55
H
89 91Right-handed 310
Helix 56
56
H
109 131Right-handed alpha
Helix 57
57
H
133 137Right-handed 310
Helix 58
58
H
139 146Right-handed alpha
Helix 59
59
I
4 10Right-handed 310
Helix 60
60
I
12 25Right-handed alpha
Helix 61
61
I
45 64Right-handed alpha
Helix 62
62
I
71 88Right-handed alpha
Helix 63
63
I
109 131Right-handed alpha
Helix 64
64
I
133 137Right-handed 310
Helix 65
65
I
139 144Right-handed alpha
Helix 66
66
J
4 8Right-handed 310
Helix 67
67
J
12 25Right-handed alpha
Helix 68
68
J
45 64Right-handed alpha
Helix 69
69
J
71 88Right-handed alpha
Helix 70
70
J
109 131Right-handed alpha
Helix 71
71
J
133 137Right-handed 310
Helix 72
72
J
139 145Right-handed alpha
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There are 10 sheets in PDB entry 3UF2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 38first strand
Strand 2
A
103 108anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 38first strand
Strand 2
B
103 108anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
33 38first strand
Strand 2
C
103 108anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
33 38first strand
Strand 2
D
103 108anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
33 38first strand
Strand 2
E
103 108anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
33 38first strand
Strand 2
F
103 108anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
33 38first strand
Strand 2
G
103 108anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
33 38first strand
Strand 2
H
103 108anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
33 38first strand
Strand 2
I
103 108anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
33 38first strand
Strand 2
J
103 108anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il