Analysis of interatomic Contacts of Structural Units in PDB entry:
3UHA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UHA entry

There are 2 chains in PDB entry 3UHA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3VAL 367
B
 ALA 3VAL 367
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 3UHA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 32Right-handed alpha
Helix 2
2
A
47 54Right-handed alpha
Helix 3
3
A
62 67Right-handed 310
Helix 4
4
A
103 113Right-handed alpha
Helix 5
5
A
122 124Right-handed 310
Helix 6
6
A
135 157Right-handed alpha
Helix 7
7
A
171 188Right-handed alpha
Helix 8
8
A
203 217Right-handed alpha
Helix 9
9
A
219 221Right-handed 310
Helix 10
10
A
227 232Right-handed alpha
Helix 11
11
A
238 243Right-handed alpha
Helix 12
12
A
261 266Right-handed alpha
Helix 13
13
A
320 324Right-handed 310
Helix 14
14
A
325 343Right-handed alpha
Helix 15
15
A
344 347Right-handed 310
Helix 16
16
A
350 365Right-handed alpha
Helix 17
17
B
22 32Right-handed alpha
Helix 18
18
B
47 54Right-handed alpha
Helix 19
19
B
62 66Right-handed 310
Helix 20
20
B
103 115Right-handed alpha
Helix 21
21
B
122 124Right-handed 310
Helix 22
22
B
135 157Right-handed alpha
Helix 23
23
B
171 188Right-handed alpha
Helix 24
24
B
203 216Right-handed alpha
Helix 25
25
B
219 221Right-handed 310
Helix 26
26
B
227 232Right-handed alpha
Helix 27
27
B
238 243Right-handed alpha
Helix 28
28
B
261 266Right-handed alpha
Helix 29
29
B
320 324Right-handed 310
Helix 30
30
B
325 342Right-handed alpha
Helix 31
31
B
343 347Right-handed 310
Helix 32
32
B
350 366Right-handed alpha
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There are 4 sheets in PDB entry 3UHA. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 59first strand
Strand 2
A
35 39parallel
Strand 3
A
5 8parallel
Strand 4
A
72 74parallel
Strand 5
A
90 93parallel
Strand 6
A
117 120parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 226first strand
Strand 2
A
196 199parallel
Strand 3
A
245 248parallel
Strand 4
A
274 277parallel
Strand 5
A
313 316parallel
Strand 6
A
303 305anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 59first strand
Strand 2
B
35 39parallel
Strand 3
B
5 8parallel
Strand 4
B
72 74parallel
Strand 5
B
90 93parallel
Strand 6
B
117 120parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
223 226first strand
Strand 2
B
196 199parallel
Strand 3
B
245 248parallel
Strand 4
B
274 277parallel
Strand 5
B
313 316parallel
Strand 6
B
303 305anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il