Analysis of interatomic Contacts of Structural Units in PDB entry:
3UHP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UHP entry

There are 2 chains in PDB entry 3UHP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE -4LEU 247
B
 TYR -5ASN 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 3UHP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 23Right-handed alpha
Helix 2
2
A
34 37Right-handed 310
Helix 3
3
A
43 60Right-handed alpha
Helix 4
4
A
70 77Right-handed alpha
Helix 5
5
A
92 105Right-handed alpha
Helix 6
6
A
116 122Right-handed alpha
Helix 7
7
A
123 132Right-handed alpha
Helix 8
8
A
144 151Right-handed alpha
Helix 9
9
A
156 167Right-handed alpha
Helix 10
10
A
182 185Right-handed 310
Helix 11
11
A
186 195Right-handed alpha
Helix 12
12
A
202 215Right-handed alpha
Helix 13
13
A
233 246Right-handed alpha
Helix 14
14
B
12 22Right-handed alpha
Helix 15
15
B
34 37Right-handed 310
Helix 16
16
B
43 60Right-handed alpha
Helix 17
17
B
72 77Right-handed alpha
Helix 18
18
B
77 85Right-handed alpha
Helix 19
19
B
92 105Right-handed alpha
Helix 20
20
B
116 122Right-handed alpha
Helix 21
21
B
123 132Right-handed alpha
Helix 22
22
B
144 151Right-handed alpha
Helix 23
23
B
155 167Right-handed alpha
Helix 24
24
B
182 185Right-handed 310
Helix 25
25
B
186 195Right-handed alpha
Helix 26
26
B
202 215Right-handed alpha
Helix 27
27
B
233 246Right-handed alpha
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There are 4 sheets in PDB entry 3UHP. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 91first strand
Strand 2
A
65 68parallel
Strand 3
A
2 7parallel
Strand 4
A
27 32parallel
Strand 5
A
225 230parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 141first strand
Strand 2
A
111 115parallel
Strand 3
A
175 178parallel
Strand 4
A
199 201parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 91first strand
Strand 2
B
65 68parallel
Strand 3
B
2 7parallel
Strand 4
B
27 32parallel
Strand 5
B
225 230parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 141first strand
Strand 2
B
111 115parallel
Strand 3
B
175 178parallel
Strand 4
B
199 201parallel
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