Analysis of interatomic Contacts of Structural Units in PDB entry:
3UIP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UIP entry

There are 7 chains in PDB entry 3UIP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2VAL 92
A
 LEU 94TYR 137
A
 GLN 139SER 158
B
 GLU 20GLY 97
C
 ALA 432VAL 587
D
 LEU 2630PHE 2658
D
 TYR 2660LEU 2690
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3UIP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 19Right-handed alpha
Helix 2
2
A
94 98Right-handed 310
Helix 3
3
A
108 122Right-handed alpha
Helix 4
4
A
130 140Right-handed alpha
Helix 5
5
A
140 155Right-handed alpha
Helix 6
6
B
44 56Right-handed alpha
Helix 7
7
B
58 60Right-handed 310
Helix 8
8
B
76 81Right-handed alpha
Helix 9
9
C
433 440Right-handed alpha
Helix 10
10
C
442 449Right-handed alpha
Helix 11
11
C
452 461Right-handed alpha
Helix 12
12
C
465 478Right-handed alpha
Helix 13
13
C
483 503Right-handed alpha
Helix 14
14
C
508 520Right-handed alpha
Helix 15
15
C
535 546Right-handed alpha
Helix 16
16
C
552 554Right-handed 310
Helix 17
17
C
555 565Right-handed alpha
Helix 18
18
C
567 573Right-handed alpha
Helix 19
19
C
573 586Right-handed alpha
Helix 20
20
D
2641 2651Right-handed alpha
Helix 21
21
D
2656 2662Right-handed 310
Helix 22
22
D
2676 2683Right-handed alpha
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There are 2 sheets in PDB entry 3UIP. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 30first strand
Strand 2
A
36 46anti-parallel
Strand 3
A
57 63anti-parallel
Strand 4
A
74 77anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 70first strand
Strand 2
B
62 66anti-parallel
Strand 3
B
87 92anti-parallel
Strand 4
B
21 28parallel
Strand 5
B
33 39anti-parallel
Strand 6
D
2632 2637anti-parallel
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